Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p29860 Brassica napus
A09p08140 Brassica napus
Aa31LG1G18840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3294 Anthoceros agrestis
Actinidia24594 Actinidia chinensis
Ah.11g042030 Amaranthus hybridus
Ah.11g051120 Amaranthus hybridus
AL8G40200 Arabidopsis lyrata
Aqoxy5G03762 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.W5ECLN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X0DT51 Arachis hypogaea
AT5G63135 Arabidopsis thaliana
ATR0743G118 Amborella trichopoda
ATR0824G277 Amborella trichopoda
Atru.chr9.2568 Acer truncatum
AUR62008151 Chenopodium quinoa
BcaB02g09725 Brassica carinata
BcaC01g02557 Brassica carinata
BcaC04g23358 Brassica carinata
BcaC09g51351 Brassica carinata
BolC3t14543H Brassica oleracea
BolC3t18603H Brassica oleracea
BolC3t18607H Brassica oleracea
BolC9t53833H Brassica oleracea
BraA06t25934Z Brassica rapa
BraA09t36465Z Brassica rapa
C03p63500 Brassica napus
C09p09200 Brassica napus
CAN.G338.27 Capsicum annuum
CANSAT80G0726 Cannabis sativa
CARHR276970 Cardamine hirsuta
Carub.0008s2389 Capsella rubella
Ca_16134_v3 Cicer arietinum L.
CBR_g45542 Chara braunii
Cc04_g11640 Coffea canephora
CiPaw.11G020900 Carya illinoinensis
CiPaw.12G030600 Carya illinoinensis
ClCG01G013460 Citrullus lanatus
COL.COLO4_05561 Corchorus olitorius
Cpa.g.sc159.33 Carica papaya
CsaV3_1G008810 Cucumis sativus L.
CSS0043708 Camellia sinensis var. sinensis
DCAR_006239 Daucus carota
Dinv20602 Davidia involucrata
Duzib205G0595 Durio zibethinus
ECA247G3417 Erigeron canadensis
EL10Ac5g10662 Beta vulgaris
Eucgr.K02801 Eucalyptus grandis
FAN08G0020 Fragaria x ananassa
FAN18G0637 Fragaria x ananassa
FvH4_5g06250 Fragaria vesca
Glyma.04G187800 Glycine max
Glyma.06G177900 Glycine max
Gohir.A12G199700 Gossypium hirsutum
Gohir.D12G202400 Gossypium hirsutum
Gorai.008G217400 Gossypium raimondii
GSVIVG01007657001 Vitis vinifera
HanXRQChr04g0101331 Helianthus annuus
Haze_07576 Corylus avellana
Hma1.2p1_0046F.1_g027080 Hydrangea macrophylla
HPP92_024272 Vanilla planifolia
Hund02782 Selenicereus undatus
Lalb_Chr08g0236711 Lupinus albus
Lj1g0014247 Lotus japonicus
Lj9C443G5 Lonicera japonica
Lsat_1_v5_gn_5_14241 Lactuca sativa
Manes.14G061000 Manihot esculenta
Mapoly0052s0030 Marchantia polymorpha
MBI15_g24199_MAGBIO Magnolia biondii
MD14G1172000 Malus domestica
Medtr3g077017 Medicago truncatula
MELO3C002295.2 Cucumis melo
MELO3C035410.2 Cucumis melo
Migut.O00152 Erythranthe guttata
MSTRG.11491 Avicennia marina
MSTRG.23164 Avicennia marina
Nitab4.5_0001793g0100 Nicotiana tabacum
Nitab4.5_0003703g0070 Nicotiana tabacum
Nn3g16705 Nelumbo nucifera
Nn4g22611 Nelumbo nucifera
Oeu008873.1 Olea europaea
Os02g0593400 Oryza sativa ssp. japonica
Peaxi162Scf00089g01427 Petunia axillaris
PGR044G0957 Punica granatum
PGSC0003DMG400018185 Solanum tuberosum
Phvul.009G174500 Phaseolus vulgaris
Potri.012G085100 Populus trichocarpa
Pp3c8_17200 Physcomitrium patens
Prupe.5G166100 Prunus persica
Psat5g116320 Pisum sativum
QL10p006993 Quercus lobata
RcHm_v2.0_Chr7g0192611 Rosa chinensis
Sabra12G0061300 Salix brachista
SalBow5G1368 Salvia bowleyana
SalBow5G3606 Salvia bowleyana
Sc04g0001540 Simmondsia chinensis
Sed0018383 Sechium edule
SEGI_33834 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27846 Striga asiatica
SHI24880 Sapria himalayana
Solyc03g112290.2 Solanum lycopersicum
Sopen03g031390 Solanum pennellii
Sp2g26260 Schrenkiella parvula
TAR629G0625 Trochodendron aralioides
THA.LOC104798964 Tarenaya hassleriana
Thecc.03G024900 Theobroma cacao
Thhalv10023776m.g Eutrema salsugineum
TPR.G22880 Trifolium pratense
TWI23G0026 Tripterygium wilfordii
TWI39G0505 Tripterygium wilfordii
unitig_26.g8807 Utricularia gibba
vmacro16643 Vaccinium macrocarpon
VMungo1309G2685 Vigna mungo
Zm00001eb183600 Zea mays
Zm00001eb245930 Zea mays

User provided reference genes

Program Settings