Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G11140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4948 Anthoceros agrestis
Actinidia10005 Actinidia chinensis
Ah.05g176510 Amaranthus hybridus
AL1G10570 Arabidopsis lyrata
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea
AT1G01770 Arabidopsis thaliana
ATR0680G083 Amborella trichopoda
Atru.chr5.484 Acer truncatum
AUR62004323 Chenopodium quinoa
AUR62033321 Chenopodium quinoa
AUR62036784 Chenopodium quinoa
BolC8t52898H Brassica oleracea
BraA09t42261Z Brassica rapa
C08p53830 Brassica napus
CAN.G1527.6 Capsicum annuum
CAN.G226.8 Capsicum annuum
CAN.G78.50 Capsicum annuum
CANSAT56G3382 Cannabis sativa
CARHR000550 Cardamine hirsuta
Carub.0001s0044 Capsella rubella
Ca_23659_v3 Cicer arietinum L.
Ca_23662_v3 Cicer arietinum L.
Cc02_g37710 Coffea canephora
CDE05G1529 Ceratophyllum demersum
Cfa003952 Carpinus fangiana
Ciclev10019238m.g Citrus clementina
CiPaw.02G028700 Carya illinoinensis
ClCG05G001680 Citrullus lanatus
COL.COLO4_12678 Corchorus olitorius
Cpa.g.sc18.226 Carica papaya
CsaV3_3G009060 Cucumis sativus L.
CSS0000914 Camellia sinensis var. sinensis
CSS0011179 Camellia sinensis var. sinensis
DCAR_015941 Daucus carota
Dinv43786 Davidia involucrata
Duzib138G0243 Durio zibethinus
ECA236G3544 Erigeron canadensis
EL10Ac1g00536 Beta vulgaris
EL10Ac1g02136 Beta vulgaris
EL10Ac3g06779 Beta vulgaris
EL10Ac5g11247 Beta vulgaris
Eucgr.E00177 Eucalyptus grandis
FAN01G0340 Fragaria x ananassa
FAN03G2057 Fragaria x ananassa
FAN06G2381 Fragaria x ananassa
FAN06G3007 Fragaria x ananassa
FAN10G0464 Fragaria x ananassa
FvH4_7g13830 Fragaria vesca
Glyma.07G073500 Glycine max
Gohir.A07G142900 Gossypium hirsutum
Gohir.D07G148700 Gossypium hirsutum
Gorai.001G170100 Gossypium raimondii
GSVIVG01026850001 Vitis vinifera
HanXRQChr01g0021681 Helianthus annuus
HanXRQChr01g0025441 Helianthus annuus
HanXRQChr03g0092981 Helianthus annuus
HanXRQChr04g0121651 Helianthus annuus
Haze_15467 Corylus avellana
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla
Hma1.2p1_0001F.1_g001600 Hydrangea macrophylla
HPP92_004979 Vanilla planifolia
Hund27298 Selenicereus undatus
Lalb_Chr04g0256761 Lupinus albus
Lj3g0006815 Lotus japonicus
Lj9A581T68 Lonicera japonica
Lsat_1_v5_gn_7_5201 Lactuca sativa
Manes.01G259800 Manihot esculenta
MBI18_g09765_MAGBIO Magnolia biondii
MD01G1054400 Malus domestica
Medtr8g031480 Medicago truncatula
MELO3C006127.2 Cucumis melo
Migut.N01431 Erythranthe guttata
MSTRG.28216 Avicennia marina
Nitab4.5_0002160g0070 Nicotiana tabacum
Nitab4.5_0009210g0040 Nicotiana tabacum
Nn6g33525 Nelumbo nucifera
Os07g0457300 Oryza sativa ssp. japonica
Peaxi162Scf00020g00011 Petunia axillaris
PGR042G0621 Punica granatum
PGSC0003DMG400000156 Solanum tuberosum
Phvul.010G096000 Phaseolus vulgaris
Potri.002G157400 Populus trichocarpa
Pp3c9_2540 Physcomitrium patens
Prupe.2G164100 Prunus persica
Psat4g154080 Pisum sativum
PSO063G6634 Papaver somniferum
PSO782G3099 Papaver somniferum
QL08p049512 Quercus lobata
QL09p021383 Quercus lobata
RcHm_v2.0_Chr1g0354021 Rosa chinensis
RcHm_v2.0_Chr1g0354041 Rosa chinensis
Rhsim07G0017800 Rhododendron simsii
Sabra02G0125100 Salix brachista
SalBow5G3488 Salvia bowleyana
SalBow5G3803 Salvia bowleyana
Sc26g0001000 Simmondsia chinensis
Sed0028010 Sechium edule
SGA_v2.0_scaffold43G16441 Striga asiatica
SMO164G0214 Selaginella moellendorffii
Solyc01g094330.3 Solanum lycopersicum
Sopen01g038120 Solanum pennellii
Sp1g00530 Schrenkiella parvula
TAR375G0043 Trochodendron aralioides
THA.LOC104801448 Tarenaya hassleriana
Thecc.01G363100 Theobroma cacao
Thhalv10007047m.g Eutrema salsugineum
TPR.G4402 Trifolium pratense
TWI23G0867 Tripterygium wilfordii
unitig_748.g7107 Utricularia gibba
vmacro13305 Vaccinium macrocarpon
VMungo0331G1855 Vigna mungo
Zm00001eb306550 Zea mays

User provided reference genes

Program Settings