Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p08240 Brassica napus
Aa31LG9G3650 Aethionema arabicum
Actinidia35841 Actinidia chinensis
Ah.04g149380 Amaranthus hybridus
Ah.16g106350 Amaranthus hybridus
AL7G42630 Arabidopsis lyrata
Aqoxy2G03934 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.753CXU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJC0ES Arachis hypogaea
AT4G13870 Arabidopsis thaliana
AT4G13885 Arabidopsis thaliana
ATR0787G042 Amborella trichopoda
Atru.chr4.1579 Acer truncatum
AUR62018557 Chenopodium quinoa
AUR62020861 Chenopodium quinoa
BcaB02g08645 Brassica carinata
BcaC02g09380 Brassica carinata
BolC4t25783H Brassica oleracea
BraA04t16513Z Brassica rapa
C04p41950 Brassica napus
CAN.G1155.32 Capsicum annuum
CANSAT78G0110 Cannabis sativa
CARHR219770 Cardamine hirsuta
Carub.0007s2858 Capsella rubella
Ca_16405_v3 Cicer arietinum L.
Ca_16413_v3 Cicer arietinum L.
CBR_g965 Chara braunii
Cc03_g08460 Coffea canephora
CDE02G4051 Ceratophyllum demersum
Cfa014998 Carpinus fangiana
Ciclev10005507m.g Citrus clementina
CiPaw.01G117000 Carya illinoinensis
ClCG05G003120 Citrullus lanatus
COL.COLO4_20228 Corchorus olitorius
COL.COLO4_20229 Corchorus olitorius
Cpa.g.sc157.49 Carica papaya
Cre13.g588900 Chlamydomonas reinhardtii
CsaV3_3G010740 Cucumis sativus L.
CSS0005381 Camellia sinensis var. sinensis
DCAR_024534 Daucus carota
Dinv38173 Davidia involucrata
Duzib212G0873 Durio zibethinus
ECA248G2055 Erigeron canadensis
EL10Ac3g07455 Beta vulgaris
Eucgr.H02680 Eucalyptus grandis
FAN07G1638 Fragaria x ananassa
FAN07G2928 Fragaria x ananassa
FAN17G1408 Fragaria x ananassa
FAN22G1573 Fragaria x ananassa
FvH4_4g13310 Fragaria vesca
Glyma.11G254800 Glycine max
Glyma.18G002300 Glycine max
Gohir.A10G127500 Gossypium hirsutum
Gohir.D10G138500 Gossypium hirsutum
Gorai.011G153800 Gossypium raimondii
GSVIVG01021028001 Vitis vinifera
HanXRQChr01g0022161 Helianthus annuus
Haze_11652 Corylus avellana
Hma1.2p1_1286F.1_g273100 Hydrangea macrophylla
Hma1.2p1_1286F.1_g273110 Hydrangea macrophylla
HPP92_022603 Vanilla planifolia
Hund19009 Selenicereus undatus
Lalb_Chr23g0278321 Lupinus albus
Lj6g0000072 Lotus japonicus
Lj7C491T10 Lonicera japonica
Lsat_1_v5_gn_1_70741 Lactuca sativa
Manes.03G144300 Manihot esculenta
MBI07_g22388_MAGBIO Magnolia biondii
MBI11_g28742_MAGBIO Magnolia biondii
MBI18_g30011_MAGBIO Magnolia biondii
MCO02G498 Micromonas commoda
MD05G1230400 Malus domestica
MELO3C006293.2 Cucumis melo
Migut.G00760 Erythranthe guttata
MSTRG.9797 Avicennia marina
Nitab4.5_0000697g0190 Nicotiana tabacum
Nitab4.5_0005704g0020 Nicotiana tabacum
Nn3g20082 Nelumbo nucifera
Oeu034321.1 Olea europaea
Os04g0129200 Oryza sativa ssp. japonica
Peaxi162Scf00047g00013 Petunia axillaris
PGR083G1328 Punica granatum
PGSC0003DMG400020590 Solanum tuberosum
Phvul.001G266900 Phaseolus vulgaris
Potri.001G320201 Populus trichocarpa
Potri.017G059200 Populus trichocarpa
Pp3c12_4220 Physcomitrium patens
Prupe.1G164900 Prunus persica
Psat5g100080 Pisum sativum
PSO017G2771 Papaver somniferum
PSO063G0584 Papaver somniferum
QL06p025925 Quercus lobata
RcHm_v2.0_Chr4g0413601 Rosa chinensis
Rhsim09G0060400 Rhododendron simsii
Sabra17G0052800 Salix brachista
SalBow8G0102 Salvia bowleyana
Sc13g0000420 Simmondsia chinensis
Sed0013696 Sechium edule
SEGI_06833 Sequoiadendron giganteum
SEGI_11637 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08780 Striga asiatica
SMO144G0025 Selaginella moellendorffii
Solyc09g092340.4 Solanum lycopersicum
Sopen09g035240 Solanum pennellii
Sp7g11720 Schrenkiella parvula
TAR362G0731 Trochodendron aralioides
TAR362G1315 Trochodendron aralioides
THA.LOC104804799 Tarenaya hassleriana
Thecc.04G195200 Theobroma cacao
Thhalv10025908m.g Eutrema salsugineum
TPR.G25382 Trifolium pratense
TWI59G0841 Tripterygium wilfordii
vmacro00437 Vaccinium macrocarpon
VMungo1383G1416 Vigna mungo
Zm00001eb088960 Zea mays

User provided reference genes

Program Settings