Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p31490 Brassica napus
Aa31LG5G1570 Aethionema arabicum
Actinidia25872 Actinidia chinensis
AL6G51510 Arabidopsis lyrata
Aqoxy5G02822 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea
AT4G01790 Arabidopsis thaliana
ATR0796G043 Amborella trichopoda
Atru.chr5.861 Acer truncatum
AUR62007556 Chenopodium quinoa
AUR62020194 Chenopodium quinoa
BcaB01g02378 Brassica carinata
BcaC01g06803 Brassica carinata
BolC3t16121H Brassica oleracea
BraA03t12329Z Brassica rapa
C03p38480 Brassica napus
CAN.G100.60 Capsicum annuum
CANSAT25G0488 Cannabis sativa
CARHR249760 Cardamine hirsuta
Carub.0006s3543 Capsella rubella
Ca_17328_v3 Cicer arietinum L.
Cc04_g01560 Coffea canephora
CDE02G1393 Ceratophyllum demersum
CDE02G2618 Ceratophyllum demersum
CDE04G2744 Ceratophyllum demersum
Cfa004914 Carpinus fangiana
Ciclev10022352m.g Citrus clementina
CiPaw.07G125600 Carya illinoinensis
CiPaw.08G082500 Carya illinoinensis
ClCG01G007180 Citrullus lanatus
COL.COLO4_23128 Corchorus olitorius
Cpa.g.sc112.76 Carica papaya
Cpa.g.sc57.16 Carica papaya
CsaV3_5G018620 Cucumis sativus L.
CSS0050251 Camellia sinensis var. sinensis
DCAR_012297 Daucus carota
Dinv12080 Davidia involucrata
Duzib133G0680 Durio zibethinus
Duzib138G1646 Durio zibethinus
Duzib268G1378 Durio zibethinus
Duzib268G1723 Durio zibethinus
Duzib268G1823 Durio zibethinus
ECA236G2063 Erigeron canadensis
EL10Ac6g15579 Beta vulgaris
Eucgr.A01003 Eucalyptus grandis
FAN19G2776 Fragaria x ananassa
FAN23G2129 Fragaria x ananassa
FAN26G0658 Fragaria x ananassa
FAN28G2841 Fragaria x ananassa
FvH4_1g26230 Fragaria vesca
Glyma.04G053700 Glycine max
Glyma.10G137900 Glycine max
Gohir.A11G104700 Gossypium hirsutum
Gohir.D11G109500 Gossypium hirsutum
Gorai.007G117100 Gossypium raimondii
GSVIVG01028248001 Vitis vinifera
HanXRQChr15g0493961 Helianthus annuus
Haze_05149 Corylus avellana
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla
HPP92_012764 Vanilla planifolia
Hund02455 Selenicereus undatus
Lalb_Chr11g0071671 Lupinus albus
Lj1A7G42 Lonicera japonica
Lj5g0006261 Lotus japonicus
Lsat_1_v5_gn_7_107761 Lactuca sativa
Manes.05G008900 Manihot esculenta
Mapoly0147s0029 Marchantia polymorpha
MBI19_g30288_MAGBIO Magnolia biondii
MD09G1290400 Malus domestica
MD17G1285100 Malus domestica
Medtr8g103265 Medicago truncatula
MELO3C005192.2 Cucumis melo
Migut.M01655 Erythranthe guttata
MSTRG.6995 Avicennia marina
Nitab4.5_0000222g0410 Nicotiana tabacum
Nitab4.5_0003092g0050 Nicotiana tabacum
Nn4g24845 Nelumbo nucifera
Oeu031543.1 Olea europaea
Os07g0636400 Oryza sativa ssp. japonica
Peaxi162Scf00309g00082 Petunia axillaris
PGR042G1466 Punica granatum
PGSC0003DMG400001120 Solanum tuberosum
Phvul.L002843 Phaseolus vulgaris
Potri.014G112200 Populus trichocarpa
Pp3c20_22530 Physcomitrium patens
Prupe.3G002600 Prunus persica
Psat7g015240 Pisum sativum
PSO170G4516 Papaver somniferum
PSO357G0421 Papaver somniferum
QL05p057365 Quercus lobata
RcHm_v2.0_Chr3g0485771 Rosa chinensis
Rhsim01G0293500 Rhododendron simsii
Sabra14G0082500 Salix brachista
SalBow5G4120 Salvia bowleyana
Sc02g0004000 Simmondsia chinensis
Sed0019401 Sechium edule
SEGI_25216 Sequoiadendron giganteum
SGA_v2.0_scaffold204G41642 Striga asiatica
Solyc01g080830.3 Solanum lycopersicum
Sopen01g030650 Solanum pennellii
Sp3g31270 Schrenkiella parvula
Sp6g01640 Schrenkiella parvula
SpUn0082_0020 Schrenkiella parvula
TAR362G0624 Trochodendron aralioides
THA.LOC104799825 Tarenaya hassleriana
Thecc.01G325400 Theobroma cacao
Thhalv10029024m.g Eutrema salsugineum
TPR.G23504 Trifolium pratense
TWI81G0461 Tripterygium wilfordii
TWI81G0948 Tripterygium wilfordii
unitig_8.g4039 Utricularia gibba
vmacro15094 Vaccinium macrocarpon
VMungo0720G2811 Vigna mungo
Zm00001eb328690 Zea mays

User provided reference genes

Program Settings