Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15500 Brassica napus
Aa31sc424G20 Aethionema arabicum
Actinidia15428 Actinidia chinensis
AL7G29110 Arabidopsis lyrata
Aqoxy6G02228 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea
AT4G24175 Arabidopsis thaliana
ATR0564G524 Amborella trichopoda
Atru.chr13.275 Acer truncatum
Atru.chr13.277_Atru.chr13.278 Acer truncatum
AUR62035015 Chenopodium quinoa
AUR62041899 Chenopodium quinoa
BcaC09g50900 Brassica carinata
BcaNung01123 Brassica carinata
BolC1t01871H Brassica oleracea
BraA01t01489Z Brassica rapa
C01p19420 Brassica napus
CAN.G311.39 Capsicum annuum
CANSAT25G0709 Cannabis sativa
CARHR231580 Cardamine hirsuta
Carub.0007s1692 Capsella rubella
Ca_11200_v3 Cicer arietinum L.
CBR_g44391 Chara braunii
Cc10_g01570 Coffea canephora
CDE04G0963 Ceratophyllum demersum
Cfa006087 Carpinus fangiana
Ciclev10001912m.g Citrus clementina
CiPaw.08G066800 Carya illinoinensis
ClCG05G018220 Citrullus lanatus
COL.COLO4_26134 Corchorus olitorius
Cpa.g.sc26.57 Carica papaya
CsaV3_3G045930 Cucumis sativus L.
CSS0026180 Camellia sinensis var. sinensis
CSS0040454 Camellia sinensis var. sinensis
DCAR_021031 Daucus carota
Dinv39526 Davidia involucrata
Duzib093G1023 Durio zibethinus
ECA232G2413 Erigeron canadensis
EL10Ac1g02185 Beta vulgaris
Eucgr.F00573 Eucalyptus grandis
Eucgr.F00575 Eucalyptus grandis
Eucgr.H00979 Eucalyptus grandis
Eucgr.H00983 Eucalyptus grandis
Eucgr.H00986 Eucalyptus grandis
Eucgr.H00993 Eucalyptus grandis
FAN15G2275 Fragaria x ananassa
FAN20G0256 Fragaria x ananassa
FAN27G0483 Fragaria x ananassa
FvH4_2g38330 Fragaria vesca
Glyma.20G108900 Glycine max
Gohir.A01G110800 Gossypium hirsutum
Gohir.D01G097400 Gossypium hirsutum
Gorai.002G123100 Gossypium raimondii
GSVIVG01009926001 Vitis vinifera
HanXRQChr05g0145201 Helianthus annuus
Haze_04763 Corylus avellana
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla
HPP92_004984 Vanilla planifolia
Hund05184 Selenicereus undatus
Lalb_Chr02g0143331 Lupinus albus
Lj4A797T59 Lonicera japonica
Lj5g0003318 Lotus japonicus
Lsat_1_v5_gn_0_34641 Lactuca sativa
Manes.05G146300 Manihot esculenta
Mapoly0138s0045 Marchantia polymorpha
MBI05_g19267_MAGBIO Magnolia biondii
MD08G1011800 Malus domestica
MD08G1012000 Malus domestica
Medtr1g112320 Medicago truncatula
MELO3C003746.2 Cucumis melo
Migut.C00848 Erythranthe guttata
MSTRG.1185 Avicennia marina
Nitab4.5_0008000g0010 Nicotiana tabacum
Nn1g05932 Nelumbo nucifera
Oeu027521.1 Olea europaea
Os04g0250700 Oryza sativa ssp. japonica
Peaxi162Scf00553g00101 Petunia axillaris
PGR031G2234 Punica granatum
PGSC0003DMG401009870 Solanum tuberosum
Phvul.007G020200 Phaseolus vulgaris
Potri.005G240800 Populus trichocarpa
Pp3c5_3830 Physcomitrium patens
Prupe.1G364300 Prunus persica
Psat6g231560 Pisum sativum
PSO541G1271 Papaver somniferum
PSO675G8288 Papaver somniferum
QL02p011816 Quercus lobata
RcHm_v2.0_Chr6g0303031 Rosa chinensis
Rhsim06G0020700 Rhododendron simsii
Sabra02G0016800 Salix brachista
Sabra05G0186300 Salix brachista
Sed0014296 Sechium edule
Sed0023128 Sechium edule
SEGI_16371 Sequoiadendron giganteum
SEGI_37599 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05927 Striga asiatica
Solyc04g081540.3 Solanum lycopersicum
Sopen04g035150 Solanum pennellii
Sp7g22140 Schrenkiella parvula
TAR381G1583 Trochodendron aralioides
TAR536G0001 Trochodendron aralioides
TAR628G0560 Trochodendron aralioides
THA.LOC104798667 Tarenaya hassleriana
THA.LOC104798678 Tarenaya hassleriana
Thecc.08G046000 Theobroma cacao
Thhalv10025797m.g Eutrema salsugineum
TPR.G2436 Trifolium pratense
TWI12G0084 Tripterygium wilfordii
unitig_748.g7725 Utricularia gibba
vmacro07578 Vaccinium macrocarpon
VMungo0720G0770 Vigna mungo
Zm00001eb086730 Zea mays

User provided reference genes

Program Settings