Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p46470 Brassica napus
Aa31LG9G7390 Aethionema arabicum
Actinidia07663 Actinidia chinensis
Actinidia39540 Actinidia chinensis
Ah.02g125570 Amaranthus hybridus
AL8G12990 Arabidopsis lyrata
Aqoxy1G01892 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5H3RNB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9V28L0 Arachis hypogaea
AT5G45660 Arabidopsis thaliana
ATR0737G097 Amborella trichopoda
Atru.chr10.1476 Acer truncatum
AUR62027636 Chenopodium quinoa
AUR62035842 Chenopodium quinoa
BcaC06g31531 Brassica carinata
BcaC06g34413 Brassica carinata
BolC7t43414H Brassica oleracea
BraA06t27520Z Brassica rapa
C07p28780 Brassica napus
CAN.G257.117 Capsicum annuum
CANSAT35G0299 Cannabis sativa
CARHR176320 Cardamine hirsuta
Carub.0008s0235 Capsella rubella
Ca_00496_v3 Cicer arietinum L.
Ca_30235_v3 Cicer arietinum L.
Cc02_g16200 Coffea canephora
Cfa001060 Carpinus fangiana
Ciclev10016662m.g Citrus clementina
CiPaw.09G132600 Carya illinoinensis
CiPaw.09G132700 Carya illinoinensis
ClCG03G007290 Citrullus lanatus
COL.COLO4_22824 Corchorus olitorius
Cpa.g.sc51.7 Carica papaya
CsaV3_1G032900 Cucumis sativus L.
CSS0021911 Camellia sinensis var. sinensis
CSS0042403 Camellia sinensis var. sinensis
Dinv32313 Davidia involucrata
Duzib192G0634 Durio zibethinus
ECA248G0802 Erigeron canadensis
ECA248G3047 Erigeron canadensis
EL10Ac8g19830 Beta vulgaris
Eucgr.E02869 Eucalyptus grandis
FAN07G0931 Fragaria x ananassa
FAN11G1072 Fragaria x ananassa
FAN12G2652 Fragaria x ananassa
FAN16G1632 Fragaria x ananassa
FAN22G0056 Fragaria x ananassa
FAN25G0438 Fragaria x ananassa
FvH4_3g06600 Fragaria vesca
FvH4_4g34020 Fragaria vesca
Glyma.13G222900 Glycine max
Gohir.A05G152300 Gossypium hirsutum
Gohir.D05G154800 Gossypium hirsutum
Gorai.009G159100 Gossypium raimondii
GSVIVG01021310001 Vitis vinifera
GSVIVG01021311001 Vitis vinifera
HanXRQChr02g0055391 Helianthus annuus
HanXRQChr02g0055401 Helianthus annuus
Haze_05450 Corylus avellana
Haze_05452 Corylus avellana
HPP92_009092 Vanilla planifolia
Hund21573 Selenicereus undatus
Lalb_Chr18g0055011 Lupinus albus
Lalb_Chr18g0055041 Lupinus albus
Lj2A313T77 Lonicera japonica
Lj6g0008479 Lotus japonicus
Lsat_1_v5_gn_0_21300 Lactuca sativa
Lsat_1_v5_gn_1_112261 Lactuca sativa
Manes.17G062400 Manihot esculenta
MD00G1093500 Malus domestica
MD10G1270500 Malus domestica
Medtr2g018105 Medicago truncatula
MELO3C002693.2 Cucumis melo
Migut.M00982 Erythranthe guttata
MSTRG.16189 Avicennia marina
Nitab4.5_0003913g0060 Nicotiana tabacum
Nitab4.5_0010884g0010 Nicotiana tabacum
Nn3g20980 Nelumbo nucifera
Oeu042433.1 Olea europaea
Os01g0727900 Oryza sativa ssp. japonica
Os04g0574350 Oryza sativa ssp. japonica
PGR042G2565 Punica granatum
PGSC0003DMG400007245 Solanum tuberosum
Phvul.006G168900 Phaseolus vulgaris
Potri.011G076600 Populus trichocarpa
Pp3c13_11400 Physcomitrium patens
Prupe.4G071300 Prunus persica
Psat1g192720 Pisum sativum
PSO541G0278 Papaver somniferum
PSO675G0867 Papaver somniferum
QL05p052638 Quercus lobata
QL05p052648 Quercus lobata
RcHm_v2.0_Chr5g0012541 Rosa chinensis
Rhsim02G0123400 Rhododendron simsii
Sabra11G0063700 Salix brachista
SalBow8G0548 Salvia bowleyana
SalBow8G1131 Salvia bowleyana
Sed0009046 Sechium edule
SEGI_37019 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08383 Striga asiatica
SGA_v2.0_scaffold1G00109 Striga asiatica
SGA_v2.0_scaffold273G46455 Striga asiatica
Solyc02g071600.4 Solanum lycopersicum
Sopen02g020620 Solanum pennellii
Sp2g10550 Schrenkiella parvula
TAR627G0978 Trochodendron aralioides
THA.LOC104798448 Tarenaya hassleriana
Thecc.06G160300 Theobroma cacao
Thhalv10001012m.g Eutrema salsugineum
TPR.G4467 Trifolium pratense
TWI53G1777 Tripterygium wilfordii
TWI73G0998 Tripterygium wilfordii
VMungo0540G1786 Vigna mungo
Zm00001eb045900 Zea mays
Zm00001eb154290 Zea mays

User provided reference genes

Program Settings