Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p28700 Brassica napus
Aa31LG2G10550 Aethionema arabicum
Actinidia10201 Actinidia chinensis
Actinidia22696 Actinidia chinensis
Ah.09g227430 Amaranthus hybridus
AL2G17470 Arabidopsis lyrata
Aqoxy6G02602 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea
AT1G59600 Arabidopsis thaliana
ATR0739G011 Amborella trichopoda
Atru.chr13.835 Acer truncatum
AUR62022479 Chenopodium quinoa
AUR62022480 Chenopodium quinoa
BcaB04g20216 Brassica carinata
BcaC02g10644 Brassica carinata
BolC1t03593H Brassica oleracea
BolC4t24190H Brassica oleracea
BraA01t03033Z Brassica rapa
C01p36350 Brassica napus
C04p26140 Brassica napus
CAN.G724.27 Capsicum annuum
CANSAT25G3409 Cannabis sativa
CARHR283790 Cardamine hirsuta
Carub.0002s0585 Capsella rubella
Ca_13215_v3 Cicer arietinum L.
CBR_g51257 Chara braunii
Cc10_g05800 Coffea canephora
CDE04G0359 Ceratophyllum demersum
Cfa010280 Carpinus fangiana
Cfa013775 Carpinus fangiana
Ciclev10001733m.g Citrus clementina
CiPaw.07G174600 Carya illinoinensis
ClCG08G016520 Citrullus lanatus
COL.COLO4_28503 Corchorus olitorius
Cpa.g.sc142.28 Carica papaya
CsaV3_2G026090 Cucumis sativus L.
CSS0020437 Camellia sinensis var. sinensis
CSS0026693 Camellia sinensis var. sinensis
DCAR_020049 Daucus carota
Dinv39219 Davidia involucrata
Duzib093G1923 Durio zibethinus
ECA246G2880 Erigeron canadensis
EL10Ac1g02376 Beta vulgaris
EL10Ac1g02379 Beta vulgaris
Eucgr.F02250 Eucalyptus grandis
FAN15G0662 Fragaria x ananassa
FAN20G1263 Fragaria x ananassa
FAN24G2490 Fragaria x ananassa
FAN27G0228 Fragaria x ananassa
FvH4_2g33060 Fragaria vesca
Glyma.07G264001 Glycine max
Glyma.14G089018 Glycine max
Gohir.A05G210300 Gossypium hirsutum
Gohir.D05G213600 Gossypium hirsutum
Gorai.009G220300 Gossypium raimondii
GSVIVG01009341001 Vitis vinifera
HanXRQChr08g0229631 Helianthus annuus
Haze_22433 Corylus avellana
HPP92_009523 Vanilla planifolia
HPP92_009559 Vanilla planifolia
Hund05299 Selenicereus undatus
Lalb_Chr14g0368181 Lupinus albus
Lj4A758G77 Lonicera japonica
Lj5g0000926 Lotus japonicus
Lsat_1_v5_gn_6_110920 Lactuca sativa
Manes.18G046700 Manihot esculenta
MBI15_g25904_MAGBIO Magnolia biondii
MBI16_g23890_MAGBIO Magnolia biondii
MD15G1069100 Malus domestica
Medtr1g018000 Medicago truncatula
MELO3C010802.2 Cucumis melo
Migut.N02783 Erythranthe guttata
MSTRG.24376 Avicennia marina
Nitab4.5_0002484g0050 Nicotiana tabacum
Nitab4.5_0004654g0020 Nicotiana tabacum
Nn5g30604 Nelumbo nucifera
Oeu049903.1 Olea europaea
Os01g0593100 Oryza sativa ssp. japonica
Os07g0586000 Oryza sativa ssp. japonica
Peaxi162Scf00081g02114 Petunia axillaris
PGR031G1511 Punica granatum
PGSC0003DMG400010608 Solanum tuberosum
Phvul.001G028000 Phaseolus vulgaris
Potri.002G118300 Populus trichocarpa
Pp3c12_1620 Physcomitrium patens
Prupe.1G422600 Prunus persica
Psat0s3396g0160 Pisum sativum
Psat6g018160 Pisum sativum
Psat7g107960 Pisum sativum
PSO541G2153 Papaver somniferum
PSO541G3524 Papaver somniferum
PSO675G0096 Papaver somniferum
QL12p038133 Quercus lobata
RcHm_v2.0_Chr6g0309651 Rosa chinensis
Rhsim06G0062400 Rhododendron simsii
Sc02g0007890 Simmondsia chinensis
Sed0002112 Sechium edule
SEGI_02529 Sequoiadendron giganteum
SEGI_26692 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11833 Striga asiatica
SMO334G0101 Selaginella moellendorffii
Solyc04g077820.4 Solanum lycopersicum
Sopen04g031420 Solanum pennellii
Sp2g04980 Schrenkiella parvula
TAR376G0445 Trochodendron aralioides
THA.LOC104816754 Tarenaya hassleriana
Thecc.08G088500 Theobroma cacao
Thhalv10023590m.g Eutrema salsugineum
TPR.G37796 Trifolium pratense
TWI12G1073 Tripterygium wilfordii
unitig_744.g24127 Utricularia gibba
VMungo0647G0836 Vigna mungo
Zm00001eb325900 Zea mays

User provided reference genes

Program Settings