Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p52730 Brassica napus
Aa31LG10G14620 Aethionema arabicum
Actinidia12660 Actinidia chinensis
AL5G42750 Arabidopsis lyrata
Aqoxy7G00836 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.96FU63 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9NP6XU Arachis hypogaea
AT3G60480 Arabidopsis thaliana
ATR0057G003 Amborella trichopoda
ATR0767G212 Amborella trichopoda
Atru.chr4.2323 Acer truncatum
AUR62013722 Chenopodium quinoa
AUR62018049 Chenopodium quinoa
AUR62023432 Chenopodium quinoa
BcaC07g40567 Brassica carinata
BcaC07g40569 Brassica carinata
BcaC07g42775 Brassica carinata
BolC8t51138H Brassica oleracea
C08p35470 Brassica napus
CANSAT21G1424 Cannabis sativa
CARHR170860 Cardamine hirsuta
Carub.0005s2721 Capsella rubella
Ca_27396_v3 Cicer arietinum L.
Cc00_g20460 Coffea canephora
CDE02G3860 Ceratophyllum demersum
CDE11G0572 Ceratophyllum demersum
Cfa012992 Carpinus fangiana
Ciclev10023020m.g Citrus clementina
CiPaw.13G028600 Carya illinoinensis
ClCG05G000390 Citrullus lanatus
COL.COLO4_12436 Corchorus olitorius
COL.COLO4_24647 Corchorus olitorius
Cpa.g.sc5.223 Carica papaya
CsaV3_3G007550 Cucumis sativus L.
CSS0003978 Camellia sinensis var. sinensis
DCAR_025075 Daucus carota
Dinv43640 Davidia involucrata
Duzib138G1111 Durio zibethinus
ECA236G1236 Erigeron canadensis
EL10Ac1g00789 Beta vulgaris
Eucgr.E01580 Eucalyptus grandis
FAN01G0218 Fragaria x ananassa
FAN03G2439 Fragaria x ananassa
FAN06G1163 Fragaria x ananassa
FAN06G4415 Fragaria x ananassa
FAN10G3172 Fragaria x ananassa
FAN10G3965 Fragaria x ananassa
FvH4_7g09680 Fragaria vesca
Glyma.01G074400 Glycine max
Gohir.A08G029800 Gossypium hirsutum
Gohir.D08G040600 Gossypium hirsutum
Gorai.004G039500 Gossypium raimondii
HanXRQChr06g0168761 Helianthus annuus
Haze_02785 Corylus avellana
Haze_02790 Corylus avellana
Haze_24986 Corylus avellana
Hma1.2p1_1740F.1_g300040 Hydrangea macrophylla
HPP92_014505 Vanilla planifolia
Hund17076 Selenicereus undatus
Lalb_Chr19g0126621 Lupinus albus
Lj1g0016170 Lotus japonicus
Lsat_1_v5_gn_7_10441 Lactuca sativa
Manes.05G052600 Manihot esculenta
MD00G1058900 Malus domestica
MD07G1101100 Malus domestica
MD07G1101200 Malus domestica
Medtr7g446140 Medicago truncatula
Medtr7g446470 Medicago truncatula
MELO3C005977.2 Cucumis melo
Migut.N01755 Erythranthe guttata
Migut.O00539 Erythranthe guttata
MSTRG.28159 Avicennia marina
Nitab4.5_0001818g0020 Nicotiana tabacum
Nitab4.5_0002874g0090 Nicotiana tabacum
Nn1g00906 Nelumbo nucifera
Oeu035671.1 Olea europaea
Os04g0549400 Oryza sativa ssp. japonica
Peaxi162Scf00392g00125 Petunia axillaris
PGR042G1623 Punica granatum
PGSC0003DMG401026039 Solanum tuberosum
Phvul.008G140300 Phaseolus vulgaris
Potri.014G054300 Populus trichocarpa
Pp3c5_22300 Physcomitrium patens
Prupe.2G124300 Prunus persica
Psat3g154680 Pisum sativum
PSO675G6563 Papaver somniferum
PSO732G0264 Papaver somniferum
QL04p031942 Quercus lobata
QL04p032169 Quercus lobata
QL04p032282 Quercus lobata
QL04p033225 Quercus lobata
QL04p033368 Quercus lobata
RcHm_v2.0_Chr1g0346581 Rosa chinensis
Rhsim01G0137500 Rhododendron simsii
Sabra14G0040200 Salix brachista
SalBow5G2465 Salvia bowleyana
SalBow5G5528 Salvia bowleyana
Sc23g0003950 Simmondsia chinensis
Sed0014312 Sechium edule
SEGI_25204 Sequoiadendron giganteum
SEGI_39218 Sequoiadendron giganteum
SGA_v2.0_scaffold43G16525 Striga asiatica
SHI13603 Sapria himalayana
Solyc01g090500.4 Solanum lycopersicum
Sopen01g036290 Solanum pennellii
Sp5g02740 Schrenkiella parvula
TAR629G0288 Trochodendron aralioides
THA.LOC104817199 Tarenaya hassleriana
Thecc.01G389700 Theobroma cacao
Thecc.01G390200 Theobroma cacao
Thecc.01G390600 Theobroma cacao
TPR.G39099 Trifolium pratense
TWI59G0066 Tripterygium wilfordii
unitig_0.g2760 Utricularia gibba
VMungo1383G1377 Vigna mungo
Zm00001eb429840 Zea mays

User provided reference genes

Program Settings