Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p54410 Brassica napus
Aa31LG10G16360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis
Actinidia00061 Actinidia chinensis
Actinidia32379 Actinidia chinensis
AL5G45260 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea
AT3G62450 Arabidopsis thaliana
Atru.chr2.2418 Acer truncatum
Atru.chr4.2738 Acer truncatum
BcaB02g07336 Brassica carinata
BcaC07g40728 Brassica carinata
BcaC07g42761 Brassica carinata
BolC8t51307H Brassica oleracea
BraA09t40854Z Brassica rapa
C08p37290 Brassica napus
CAN.G1327.4 Capsicum annuum
CANSAT78G0092 Cannabis sativa
CARHR172790 Cardamine hirsuta
Carub.0005s2918 Capsella rubella
Ca_09608_v3 Cicer arietinum L.
CDE02G1545 Ceratophyllum demersum
Cfa015511 Carpinus fangiana
Ciclev10006724m.g Citrus clementina
CiPaw.02G087700 Carya illinoinensis
ClCG06G005480 Citrullus lanatus
COL.COLO4_13955 Corchorus olitorius
Cpa.g.sc16.95 Carica papaya
CSS0029112 Camellia sinensis var. sinensis
DCAR_030574 Daucus carota
Dinv16400 Davidia involucrata
Duzib151G0434 Durio zibethinus
ECA233G1626 Erigeron canadensis
EL10As5g23584 Beta vulgaris
Eucgr.H03675 Eucalyptus grandis
Eucgr.H03682 Eucalyptus grandis
Eucgr.H03704 Eucalyptus grandis
Eucgr.H03709 Eucalyptus grandis
FAN07G2315 Fragaria x ananassa
FAN12G1403 Fragaria x ananassa
FAN12G3786 Fragaria x ananassa
FAN17G2868 Fragaria x ananassa
FAN22G2172 Fragaria x ananassa
FvH4_4g16990 Fragaria vesca
Glyma.10G044600 Glycine max
Glyma.13G132200 Glycine max
Gohir.A02G045400 Gossypium hirsutum
Gohir.D02G051400 Gossypium hirsutum
Gorai.005G056700 Gossypium raimondii
HanXRQChr05g0154771 Helianthus annuus
HanXRQChr10g0285751 Helianthus annuus
HanXRQChr15g0466771 Helianthus annuus
Haze_01039 Corylus avellana
Hma1.2p1_0643F.1_g194720 Hydrangea macrophylla
Hund22020 Selenicereus undatus
Lalb_Chr14g0364951 Lupinus albus
Lalb_Chr22g0358511 Lupinus albus
Lj4g0022805 Lotus japonicus
Lj5g0014316 Lotus japonicus
Lsat_1_v5_gn_2_28060 Lactuca sativa
Manes.03G190000 Manihot esculenta
Manes.14G117300 Manihot esculenta
Mapoly0142s0032 Marchantia polymorpha
MD16G1176900 Malus domestica
Medtr1g068580 Medicago truncatula
Medtr2g005070 Medicago truncatula
Medtr2g048470 Medicago truncatula
Medtr2g048480 Medicago truncatula
MELO3C035183.2 Cucumis melo
Migut.G00223 Erythranthe guttata
MSTRG.24772 Avicennia marina
Nitab4.5_0001624g0050 Nicotiana tabacum
Oeu010965.1 Olea europaea
Oeu029280.1 Olea europaea
Os11g0107450 Oryza sativa ssp. japonica
Os12g0106550 Oryza sativa ssp. japonica
Peaxi162Scf01067g00024 Petunia axillaris
PGR004G2827 Punica granatum
PGSC0003DMG400022846 Solanum tuberosum
PGSC0003DMG400029912 Solanum tuberosum
Phvul.007G158300 Phaseolus vulgaris
Phvul.010G109000 Phaseolus vulgaris
Phvul.L002281 Phaseolus vulgaris
Potri.005G071700 Populus trichocarpa
Pp3c4_20400 Physcomitrium patens
Prupe.1G143700 Prunus persica
Psat6g067840 Pisum sativum
PSO302G0016 Papaver somniferum
QL06p006942 Quercus lobata
RcHm_v2.0_Chr1g0363231 Rosa chinensis
RcHm_v2.0_Chr4g0420661 Rosa chinensis
Rhsim02G0014500 Rhododendron simsii
Sabra05G0058700 Salix brachista
Sabra07G0080600 Salix brachista
SalBow1G8344 Salvia bowleyana
Sc19g0004830 Simmondsia chinensis
Sed0004518 Sechium edule
SEGI_10041 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31931 Striga asiatica
SGA_v2.0_scaffold57G20266 Striga asiatica
SHI00325 Sapria himalayana
Solyc01g067820.3 Solanum lycopersicum
Sopen01g029770 Solanum pennellii
Sp5g00970 Schrenkiella parvula
THA.LOC104820449 Tarenaya hassleriana
Thecc.04G275300 Theobroma cacao
Thhalv10006352m.g Eutrema salsugineum
TWI09G0325 Tripterygium wilfordii
TWI53G0190 Tripterygium wilfordii
unitig_22.g6332 Utricularia gibba
vmacro15274 Vaccinium macrocarpon
VMungo0464G0431 Vigna mungo
VMungo0720G2266 Vigna mungo
Zm00001eb094170 Zea mays
Zm00001eb163280 Zea mays

User provided reference genes

Program Settings