Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18140 Brassica napus
A08p20640 Brassica napus
Aa31LG5G12010 Aethionema arabicum
Actinidia24797 Actinidia chinensis
Ah.06g185850 Amaranthus hybridus
Ah.06g185860 Amaranthus hybridus
AL7G25870 Arabidopsis lyrata
Aqoxy3G01790 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea
AT4G26965 Arabidopsis thaliana
ATR1094G005 Amborella trichopoda
Atru.chr2.3444 Acer truncatum
AUR62020430 Chenopodium quinoa
BcaB03g12517 Brassica carinata
BcaC07g38260 Brassica carinata
BcaNung03571 Brassica carinata
BolC1t02244H Brassica oleracea
BolC8t48685H Brassica oleracea
BraA01t01769Z Brassica rapa
BraA08t34018Z Brassica rapa
C01p23100 Brassica napus
C08p10070 Brassica napus
CAN.G337.138 Capsicum annuum
CANSAT11G0469 Cannabis sativa
CARHR234570 Cardamine hirsuta
Carub.0007s1390 Capsella rubella
Ca_19852_v3 Cicer arietinum L.
Cc05_g13850 Coffea canephora
CDE05G0574 Ceratophyllum demersum
Ciclev10009642m.g Citrus clementina
CiPaw.11G190300 Carya illinoinensis
ClCG10G005400 Citrullus lanatus
Cpa.g.sc12.300 Carica papaya
Cre09.g401150 Chlamydomonas reinhardtii
CsaV3_3G005130 Cucumis sativus L.
CSS0049611 Camellia sinensis var. sinensis
DCAR_000990 Daucus carota
DCAR_022566 Daucus carota
Dinv40761 Davidia involucrata
Duzib213G0701 Durio zibethinus
ECA240G2843 Erigeron canadensis
EL10Ac4g07798 Beta vulgaris
Eucgr.F03471 Eucalyptus grandis
FAN11G3489 Fragaria x ananassa
FAN16G3045 Fragaria x ananassa
FAN21G0204 Fragaria x ananassa
FvH4_3g22870 Fragaria vesca
Glyma.08G317000 Glycine max
Glyma.18G095900 Glycine max
Gohir.A01G080100 Gossypium hirsutum
Gohir.D01G067300 Gossypium hirsutum
Gorai.002G089200 Gossypium raimondii
GSVIVG01037658001 Vitis vinifera
HanXRQChr03g0076461 Helianthus annuus
Haze_09683 Corylus avellana
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla
HPP92_004131 Vanilla planifolia
Hund23239 Selenicereus undatus
Lalb_Chr20g0113821 Lupinus albus
Lj6g0001928 Lotus japonicus
Lsat_1_v5_gn_9_93840 Lactuca sativa
Manes.03G129900 Manihot esculenta
Mapoly0093s0007 Marchantia polymorpha
MBI02_g21871_MAGBIO Magnolia biondii
MD11G1216700 Malus domestica
Medtr3g052260 Medicago truncatula
MELO3C025377.2 Cucumis melo
Migut.H01824 Erythranthe guttata
MSTRG.12976 Avicennia marina
Nitab4.5_0003495g0030 Nicotiana tabacum
Nitab4.5_0007360g0030 Nicotiana tabacum
Nn1g03514 Nelumbo nucifera
Oeu048401.1 Olea europaea
Os05g0538900 Oryza sativa ssp. japonica
Os09g0500200 Oryza sativa ssp. japonica
Peaxi162Scf00235g00220 Petunia axillaris
PGR031G2182 Punica granatum
PGSC0003DMG401022215 Solanum tuberosum
Phvul.006G044500 Phaseolus vulgaris
Potri.001G109600 Populus trichocarpa
Potri.003G122100 Populus trichocarpa
Pp3c15_25830 Physcomitrium patens
PRCOL_00006382 Prasinoderma coloniale
Prupe.4G214700 Prunus persica
Psat5g178440 Pisum sativum
PSO210G5704 Papaver somniferum
PSO832G3825 Papaver somniferum
QL08p009960 Quercus lobata
RcHm_v2.0_Chr5g0040171 Rosa chinensis
Sabra01G0082900 Salix brachista
Sabra18G0079500 Salix brachista
Sc16g0005990 Simmondsia chinensis
Sed0005355 Sechium edule
SGA_v2.0_scaffold8G04322 Striga asiatica
Solyc07g064640.3 Solanum lycopersicum
Sopen07g032840 Solanum pennellii
Sp7g24910 Schrenkiella parvula
TAR624G1327 Trochodendron aralioides
THA.LOC104813424 Tarenaya hassleriana
Thecc.07G035400 Theobroma cacao
Thhalv10026517m.g Eutrema salsugineum
TPR.G33779 Trifolium pratense
TWI38G2356 Tripterygium wilfordii
TWI39G1260 Tripterygium wilfordii
unitig_8.g4785 Utricularia gibba
vmacro02233 Vaccinium macrocarpon
vmacro02234 Vaccinium macrocarpon
VMungo0540G1312 Vigna mungo
Zm00001eb102230 Zea mays

User provided reference genes

Program Settings