Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p29590 Brassica napus
Aa31LG11G860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis
Actinidia01759 Actinidia chinensis
Actinidia19311 Actinidia chinensis
Actinidia20183 Actinidia chinensis
Ah.02g110460 Amaranthus hybridus
AL8G39840 Arabidopsis lyrata
Aqoxy3G02966 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea
AT5G62840 Arabidopsis thaliana
ATR0730G238 Amborella trichopoda
Atru.chr9.2451 Acer truncatum
AUR62008221 Chenopodium quinoa
AUR62030975 Chenopodium quinoa
BcaB02g09696 Brassica carinata
BcaC01g02525 Brassica carinata
BolC3t18645H Brassica oleracea
BraA06t25905Z Brassica rapa
C03p63900 Brassica napus
CAN.G781.17 Capsicum annuum
CANSAT80G0279 Cannabis sativa
CARHR276620 Cardamine hirsuta
Carub.0008s2355 Capsella rubella
Ca_21910_v3 Cicer arietinum L.
Cc04_g13740 Coffea canephora
Cfa019105 Carpinus fangiana
Ciclev10021410m.g Citrus clementina
CiPaw.11G027700 Carya illinoinensis
ClCG01G013080 Citrullus lanatus
COL.COLO4_04599 Corchorus olitorius
Cpa.g.sc124.48 Carica papaya
Cre06.g272300 Chlamydomonas reinhardtii
CsaV3_1G008420 Cucumis sativus L.
CSS0041391 Camellia sinensis var. sinensis
DCAR_006105 Daucus carota
Dinv09149 Davidia involucrata
Duzib068G1137 Durio zibethinus
ECA236G1157 Erigeron canadensis
EL10Ac5g10748 Beta vulgaris
EL10Ac5g10761 Beta vulgaris
Eucgr.B00368 Eucalyptus grandis
FAN04G2667 Fragaria x ananassa
FAN08G3443 Fragaria x ananassa
FAN18G4193 Fragaria x ananassa
FvH4_5g05200 Fragaria vesca
Glyma.05G036900 Glycine max
Gohir.A11G001400 Gossypium hirsutum
Gohir.D11G001000 Gossypium hirsutum
Gorai.007G001900 Gossypium raimondii
GSVIVG01007766001 Vitis vinifera
HanXRQChr16g0517271 Helianthus annuus
Haze_07457 Corylus avellana
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla
HPP92_024712 Vanilla planifolia
Hund09427 Selenicereus undatus
Hund09430 Selenicereus undatus
Lalb_Chr07g0182691 Lupinus albus
Lj4g0026943 Lotus japonicus
Lj5C123T7 Lonicera japonica
Lj5C123T8 Lonicera japonica
Lsat_1_v5_gn_5_17180 Lactuca sativa
Manes.06G104000 Manihot esculenta
Mapoly0091s0071 Marchantia polymorpha
MBI16_g05651_MAGBIO Magnolia biondii
MBI16_g32800_MAGBIO Magnolia biondii
MCO16G270 Micromonas commoda
MD06G1175700 Malus domestica
MD14G1182500 Malus domestica
Medtr4g106970 Medicago truncatula
MELO3C002259.2 Cucumis melo
Migut.I00022 Erythranthe guttata
MSTRG.11442 Avicennia marina
Nitab4.5_0000852g0050 Nicotiana tabacum
Nitab4.5_0005862g0020 Nicotiana tabacum
Nn4g22789 Nelumbo nucifera
Nn4g24775 Nelumbo nucifera
Oeu016368.1 Olea europaea
Os01g0660900 Oryza sativa ssp. japonica
Peaxi162Scf00017g02821 Petunia axillaris
Peaxi162Scf00017g02830 Petunia axillaris
PGR083G2867 Punica granatum
PGSC0003DMG400024494 Solanum tuberosum
Phvul.003G199600 Phaseolus vulgaris
Potri.015G074700 Populus trichocarpa
Pp3c16_7000 Physcomitrium patens
PRCOL_00001554 Prasinoderma coloniale
Prupe.5G175000 Prunus persica
Psat4g057640 Pisum sativum
Psat4g057680 Pisum sativum
PSO302G0172 Papaver somniferum
QL10p011920 Quercus lobata
RcHm_v2.0_Chr7g0193711 Rosa chinensis
Rhsim08G0171100 Rhododendron simsii
Sabra15G0098700 Salix brachista
SalBow5G1860 Salvia bowleyana
Sc12g0005390 Simmondsia chinensis
Sed0005822 Sechium edule
SEGI_12501 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27953 Striga asiatica
SMO141G0200 Selaginella moellendorffii
Solyc03g114250.4 Solanum lycopersicum
Sopen03g033350 Solanum pennellii
Sp2g25990 Schrenkiella parvula
TAR622G0425 Trochodendron aralioides
THA.LOC104798977 Tarenaya hassleriana
Thecc.03G010500 Theobroma cacao
Thhalv10004703m.g Eutrema salsugineum
TPR.G37522 Trifolium pratense
TWI81G0925 Tripterygium wilfordii
TWI81G0947 Tripterygium wilfordii
unitig_749.g13472 Utricularia gibba
vmacro19376 Vaccinium macrocarpon
VMungo1215G2532 Vigna mungo
Zm00001eb359580 Zea mays

User provided reference genes

Program Settings