Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p35860 Brassica napus
Aa31LG11G4330 Aethionema arabicum
Actinidia10522 Actinidia chinensis
Ah.12g060980 Amaranthus hybridus
Ah.12g060990 Amaranthus hybridus
AL6G36750 Arabidopsis lyrata
Aqoxy2G03820 Aquilegia oxysepala
Aqoxy5G03587 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea
ATR0739G024 Amborella trichopoda
Atru.chr7.2565 Acer truncatum
AUR62024810 Chenopodium quinoa
AUR62032410 Chenopodium quinoa
BcaNung02296 Brassica carinata
BcaNung03200 Brassica carinata
BcaNung06716 Brassica carinata
BolC7t44802H Brassica oleracea
BraA06t26511Z Brassica rapa
C07p42720 Brassica napus
CAN.G21.49 Capsicum annuum
CANSAT25G0127 Cannabis sativa
CARHR188390 Cardamine hirsuta
Ca_15778_v3 Cicer arietinum L.
Cc08_g06990 Coffea canephora
CDE02G1998 Ceratophyllum demersum
Cfa012861 Carpinus fangiana
Cfa013059 Carpinus fangiana
Ciclev10008002m.g Citrus clementina
CiPaw.07G230200 Carya illinoinensis
ClCG05G016280 Citrullus lanatus
COL.COLO4_18949 Corchorus olitorius
Cpa.g.sc127.37 Carica papaya
CsaV3_4G036540 Cucumis sativus L.
CSS0041678 Camellia sinensis var. sinensis
CSS0048576 Camellia sinensis var. sinensis
Dinv11656 Davidia involucrata
Duzib168G1051 Durio zibethinus
ECA236G4849 Erigeron canadensis
EL10Ac2g02505 Beta vulgaris
Eucgr.C02525 Eucalyptus grandis
Eucgr.C02526 Eucalyptus grandis
Eucgr.C02611 Eucalyptus grandis
Eucgr.C02612 Eucalyptus grandis
Eucgr.C02635 Eucalyptus grandis
FAN27G3133 Fragaria x ananassa
FvH4_2g41120 Fragaria vesca
Glyma.04G060900 Glycine max
Glyma.06G061500 Glycine max
Gohir.A06G101702 Gossypium hirsutum
Gohir.A06G101800 Gossypium hirsutum
Gohir.A07G032950 Gossypium hirsutum
Gohir.D06G103800 Gossypium hirsutum
Gohir.D07G036200 Gossypium hirsutum
Gorai.001G038100 Gossypium raimondii
Gorai.010G118800 Gossypium raimondii
GSVIVG01035967001 Vitis vinifera
HanXRQChr06g0176741 Helianthus annuus
Haze_21418 Corylus avellana
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla
HPP92_004696 Vanilla planifolia
Hund02990 Selenicereus undatus
Lalb_Chr23g0268221 Lupinus albus
Lj1g0027414 Lotus japonicus
Lj7C734G21 Lonicera japonica
Lsat_1_v5_gn_2_108800 Lactuca sativa
Lsat_1_v5_gn_5_171641 Lactuca sativa
Lsat_1_v5_gn_8_82201 Lactuca sativa
Manes.03G008700 Manihot esculenta
MBI15_g19327_MAGBIO Magnolia biondii
MD15G1040400 Malus domestica
Medtr3g105980 Medicago truncatula
MELO3C016958.2 Cucumis melo
Migut.A00351 Erythranthe guttata
MSTRG.25834 Avicennia marina
Nitab4.5_0000406g0060 Nicotiana tabacum
Nitab4.5_0006202g0030 Nicotiana tabacum
Nn2g12390 Nelumbo nucifera
Nn8g39897 Nelumbo nucifera
Oeu030220.2 Olea europaea
Os06g0649900 Oryza sativa ssp. japonica
Peaxi162Scf00822g00212 Petunia axillaris
PGR044G1250 Punica granatum
PGSC0003DMG400029048 Solanum tuberosum
Phvul.009G087000 Phaseolus vulgaris
Potri.018G018700 Populus trichocarpa
Pp3c3_35450 Physcomitrium patens
Prupe.1G393700 Prunus persica
Psat5g033000 Pisum sativum
PSO017G3817 Papaver somniferum
PSO170G6733 Papaver somniferum
QL02p018870 Quercus lobata
QL02p018881 Quercus lobata
RcHm_v2.0_Chr6g0299421 Rosa chinensis
Rhsim02G0213000 Rhododendron simsii
Sabra18G0021400 Salix brachista
Sc09g0010640 Simmondsia chinensis
Sed0006653 Sechium edule
SEGI_09290 Sequoiadendron giganteum
SEGI_28803 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09909 Striga asiatica
Solyc08g068580.4 Solanum lycopersicum
Sopen08g022340 Solanum pennellii
Sp2g22420 Schrenkiella parvula
TAR626G1595 Trochodendron aralioides
THA.LOC104799020 Tarenaya hassleriana
Thecc.09G015800 Theobroma cacao
Thhalv10004366m.g Eutrema salsugineum
TPR.G1832 Trifolium pratense
TWI34G0497 Tripterygium wilfordii
unitig_32.g11664 Utricularia gibba
vmacro11241 Vaccinium macrocarpon
VMungo1309G2247 Vigna mungo
Zm00001eb275030 Zea mays
Zm00001eb334470 Zea mays
Zm00001eb337170 Zea mays

User provided reference genes

Program Settings