Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p16040 Brassica napus
Aa31LG7G4500 Aethionema arabicum
Actinidia37937 Actinidia chinensis
Ah.11g039870 Amaranthus hybridus
AL1G32860 Arabidopsis lyrata
Aqoxy5G01813 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.XXR9N9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8J4EM Arachis hypogaea
AT1G20060 Arabidopsis thaliana
ATR0090G024 Amborella trichopoda
Atru.chr13.264 Acer truncatum
AUR62032598 Chenopodium quinoa
AUR62040551 Chenopodium quinoa
AUR62041481 Chenopodium quinoa
BcaB03g14335 Brassica carinata
BcaB03g14345 Brassica carinata
BolC7t42874H Brassica oleracea
BraA07t29332Z Brassica rapa
C07p23410 Brassica napus
CAN.G6.34 Capsicum annuum
CANSAT25G0116 Cannabis sativa
CARHR020530 Cardamine hirsuta
Carub.0001s1959 Capsella rubella
Ca_00838_v3 Cicer arietinum L.
Ca_15498_v3 Cicer arietinum L.
CBR_g52559 Chara braunii
Cc10_g01490 Coffea canephora
Ciclev10003784m.g Citrus clementina
CiPaw.07G147900 Carya illinoinensis
ClCG08G014220 Citrullus lanatus
COL.COLO4_26127 Corchorus olitorius
Cpa.g.sc26.310 Carica papaya
Cpa.g.sc26.311 Carica papaya
CsaV3_2G029620 Cucumis sativus L.
CSS0004225 Camellia sinensis var. sinensis
CSS0004466 Camellia sinensis var. sinensis
CSS0017639 Camellia sinensis var. sinensis
CSS0026077 Camellia sinensis var. sinensis
CSS0026676 Camellia sinensis var. sinensis
CSS0046587 Camellia sinensis var. sinensis
Dinv31864 Davidia involucrata
Duzib093G0008 Durio zibethinus
ECA238G0815 Erigeron canadensis
EL10Ac1g02169 Beta vulgaris
Eucgr.H00965 Eucalyptus grandis
Eucgr.H00967 Eucalyptus grandis
Eucgr.H00968 Eucalyptus grandis
FAN08G3418 Fragaria x ananassa
FAN15G2452 Fragaria x ananassa
FAN18G1421 Fragaria x ananassa
FAN20G1755 Fragaria x ananassa
FAN27G2636 Fragaria x ananassa
FvH4_2g38240 Fragaria vesca
FvH4_4g19391 Fragaria vesca
FvH4_5g38380 Fragaria vesca
Glyma.06G023500 Glycine max
Gohir.A05G185600 Gossypium hirsutum
Gohir.D05G188400 Gossypium hirsutum
Gorai.009G193700 Gossypium raimondii
GSVIVG01009937001 Vitis vinifera
GSVIVG01009938001 Vitis vinifera
HanXRQChr14g0431051 Helianthus annuus
Haze_22656 Corylus avellana
HPP92_014539 Vanilla planifolia
Hund05180 Selenicereus undatus
Lalb_Chr23g0266091 Lupinus albus
Lj1g0021590 Lotus japonicus
Lj4C22G4 Lonicera japonica
Lj6g0018015 Lotus japonicus
Lsat_1_v5_gn_2_12640 Lactuca sativa
Lsat_1_v5_gn_9_122000 Lactuca sativa
Manes.18G012000 Manihot esculenta
MD08G1010800 Malus domestica
Medtr3g113630 Medicago truncatula
MELO3C011020.2 Cucumis melo
Migut.C00855 Erythranthe guttata
Nitab4.5_0000337g0050 Nicotiana tabacum
Nitab4.5_0003251g0090 Nicotiana tabacum
Nn5g30750 Nelumbo nucifera
Os02g0101800 Oryza sativa ssp. japonica
Peaxi162Scf00553g00219 Petunia axillaris
Peaxi162Scf00553g00220 Petunia axillaris
PGR031G2736 Punica granatum
PGSC0003DMG400000962 Solanum tuberosum
Phvul.009G009500 Phaseolus vulgaris
Potri.013G068501 Populus trichocarpa
Prupe.1G363400 Prunus persica
Prupe.8G272100 Prunus persica
Psat0s2878g0080 Pisum sativum
PSO170G2579 Papaver somniferum
PSO700G0201 Papaver somniferum
QL02p012013 Quercus lobata
RcHm_v2.0_Chr6g0303131 Rosa chinensis
RhsimUnG0065200 Rhododendron simsii
SalBow7G2156 Salvia bowleyana
Sc15g0004860 Simmondsia chinensis
Sed0011683 Sechium edule
SEGI_37211 Sequoiadendron giganteum
SGA_v2.0_scaffold92G28210 Striga asiatica
Solyc08g042030.3 Solanum lycopersicum
Solyc08g042040.4 Solanum lycopersicum
Sopen08g012470 Solanum pennellii
Sp1g17820 Schrenkiella parvula
TAR376G0059 Trochodendron aralioides
TAR628G0089 Trochodendron aralioides
THA.LOC104811418 Tarenaya hassleriana
Thecc.08G046600 Theobroma cacao
Thhalv10006798m.g Eutrema salsugineum
TPR.G34552 Trifolium pratense
TWI34G0106 Tripterygium wilfordii
TWI56G1403 Tripterygium wilfordii
unitig_899.g15428 Utricularia gibba
vmacro04363 Vaccinium macrocarpon
vmacro04364 Vaccinium macrocarpon
VMungo1309G1702 Vigna mungo
Zm00001eb210100 Zea mays

User provided reference genes

Program Settings