Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p21630 Brassica napus
Aa31LG6G12820 Aethionema arabicum
Actinidia28729 Actinidia chinensis
Actinidia35671 Actinidia chinensis
Ah.02g129150 Amaranthus hybridus
AL7G15180 Arabidopsis lyrata
Aqoxy5G01127 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.66U8DG Arachis hypogaea
AT4G35870 Arabidopsis thaliana
ATR0661G330 Amborella trichopoda
ATR0749G053 Amborella trichopoda
Atru.chr3.890 Acer truncatum
Atru.chr3.891 Acer truncatum
Atru.chr3.900 Acer truncatum
AUR62026231 Chenopodium quinoa
AUR62026416 Chenopodium quinoa
BcaB03g12433 Brassica carinata
BcaC01g00525 Brassica carinata
BolC3t20354H Brassica oleracea
BraA08t34110Z Brassica rapa
C03p80950 Brassica napus
CAN.G1238.7 Capsicum annuum
CAN.G1341.5 Capsicum annuum
CAN.G168.36 Capsicum annuum
CAN.G890.36 Capsicum annuum
CANSAT01G2329 Cannabis sativa
CARHR244260 Cardamine hirsuta
Carub.0007s0436 Capsella rubella
Ca_03636_v3 Cicer arietinum L.
CBR_g6408 Chara braunii
Cc07_g11260 Coffea canephora
Cfa007024 Carpinus fangiana
Ciclev10024912m.g Citrus clementina
CiPaw.07G062900 Carya illinoinensis
ClCG01G020570 Citrullus lanatus
COL.COLO4_22488 Corchorus olitorius
Cpa.g.sc6.307 Carica papaya
CsaV3_6G047480 Cucumis sativus L.
CSS0014208 Camellia sinensis var. sinensis
CSS0041887 Camellia sinensis var. sinensis
DCAR_011578 Daucus carota
Dinv40140 Davidia involucrata
Duzib147G1132 Durio zibethinus
Duzib264G0985 Durio zibethinus
ECA238G2047 Erigeron canadensis
Eucgr.I02311 Eucalyptus grandis
FAN19G0159 Fragaria x ananassa
FAN19G3132 Fragaria x ananassa
FAN23G2594 Fragaria x ananassa
FAN26G2428 Fragaria x ananassa
FAN28G2763 Fragaria x ananassa
FvH4_1g11170 Fragaria vesca
Glyma.02G044800 Glycine max
Glyma.16G122300 Glycine max
Gohir.A11G172100 Gossypium hirsutum
Gohir.D11G179100 Gossypium hirsutum
Gorai.007G191000 Gossypium raimondii
HanXRQChr14g0441731 Helianthus annuus
Haze_03709 Corylus avellana
HPP92_015017 Vanilla planifolia
HPP92_015018 Vanilla planifolia
HPP92_028512 Vanilla planifolia
Lalb_Chr09g0334271 Lupinus albus
Lalb_Chr16g0391511 Lupinus albus
Lj2P484T36 Lonicera japonica
Lj4g0000234 Lotus japonicus
Manes.02G109700 Manihot esculenta
MBI05_g00179_MAGBIO Magnolia biondii
MCO05G457 Micromonas commoda
MD02G1124200 Malus domestica
MD15G1238200 Malus domestica
Medtr8g074970 Medicago truncatula
MELO3C007939.2 Cucumis melo
Migut.D00696 Erythranthe guttata
MSTRG.21326 Avicennia marina
Nitab4.5_0002105g0010 Nicotiana tabacum
Nitab4.5_0006899g0010 Nicotiana tabacum
Nn6g31928 Nelumbo nucifera
Oeu032040.1 Olea europaea
Os03g0137400 Oryza sativa ssp. japonica
Peaxi162Scf00328g00022 Petunia axillaris
PGR119G0759 Punica granatum
PGSC0003DMG400003658 Solanum tuberosum
Phvul.003G266800 Phaseolus vulgaris
Potri.005G108600 Populus trichocarpa
Potri.007G063700 Populus trichocarpa
Prupe.7G174200 Prunus persica
Psat4g102480 Pisum sativum
PSO170G0764 Papaver somniferum
PSO210G4353 Papaver somniferum
QL06p051910 Quercus lobata
QL08p014302 Quercus lobata
RcHm_v2.0_Chr2g0098461 Rosa chinensis
Rhsim08G0030500 Rhododendron simsii
Sabra05G0089000 Salix brachista
Sc07g0001190 Simmondsia chinensis
Sed0020872 Sechium edule
SEGI_26365 Sequoiadendron giganteum
SGA_v2.0_scaffold29G12165 Striga asiatica
SHI31694 Sapria himalayana
SMO201G0152 Selaginella moellendorffii
SMO328G0006 Selaginella moellendorffii
Solyc02g083430.1 Solanum lycopersicum
Sopen02g028220 Solanum pennellii
Sp7g33650 Schrenkiella parvula
TAR381G0226 Trochodendron aralioides
THA.LOC104814667 Tarenaya hassleriana
THA.LOC104819967 Tarenaya hassleriana
Thecc.01G012300 Theobroma cacao
Thhalv10024429m.g Eutrema salsugineum
TPR.G19477 Trifolium pratense
TWI53G0685 Tripterygium wilfordii
TWI73G0481 Tripterygium wilfordii
unitig_90.g27492 Utricularia gibba
VMungo0251G3358 Vigna mungo
Zm00001eb402740 Zea mays

User provided reference genes

Program Settings