Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p27630 Brassica napus
Aa31LG1G17250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis
Actinidia17615 Actinidia chinensis
Actinidia26282 Actinidia chinensis
Ah.03g146570 Amaranthus hybridus
AL6G20240 Arabidopsis lyrata
AL8G42110 Arabidopsis lyrata
Aqoxy3G02632 Aquilegia oxysepala
AT5G09830 Arabidopsis thaliana
Atru.chr4.541 Acer truncatum
AUR62003624 Chenopodium quinoa
AUR62017933 Chenopodium quinoa
BcaB04g19985 Brassica carinata
BcaB08g37169 Brassica carinata
BcaB08g37178 Brassica carinata
BcaC04g23298 Brassica carinata
BolC9t53907H Brassica oleracea
BolC9t59531H Brassica oleracea
BraA09t36529Z Brassica rapa
BraA10t44815Z Brassica rapa
C09p09990 Brassica napus
C09p67690 Brassica napus
CAN.G249.11 Capsicum annuum
CANSAT01G1375 Cannabis sativa
CARHR203570 Cardamine hirsuta
CARHR278670 Cardamine hirsuta
Carub.0006s0825 Capsella rubella
Carub.0008s2549 Capsella rubella
CBR_g19927 Chara braunii
Cc00_g00790 Coffea canephora
Cc07_g17360 Coffea canephora
CDE04G1901 Ceratophyllum demersum
CDE12G0365 Ceratophyllum demersum
Cfa002868 Carpinus fangiana
Ciclev10026852m.g Citrus clementina
CiPaw.04G083900 Carya illinoinensis
ClCG02G000690 Citrullus lanatus
COL.COLO4_22417 Corchorus olitorius
Cpa.g.sc1003.1 Carica papaya
Cre03.g164550 Chlamydomonas reinhardtii
Cre08.g385900 Chlamydomonas reinhardtii
CsaV3_2G018080 Cucumis sativus L.
CSS0007569 Camellia sinensis var. sinensis
CSS0018620 Camellia sinensis var. sinensis
DCAR_027258 Daucus carota
Dinv09934 Davidia involucrata
Duzib187G1761 Durio zibethinus
Duzib264G0933 Durio zibethinus
ECA238G4197 Erigeron canadensis
EL10Ac6g15253 Beta vulgaris
Eucgr.I00245 Eucalyptus grandis
FAN19G2906 Fragaria x ananassa
FAN23G1796 Fragaria x ananassa
FAN28G2803 Fragaria x ananassa
FvH4_1g23590 Fragaria vesca
Glyma.05G188300 Glycine max
Glyma.08G146400 Glycine max
Gohir.A02G138100 Gossypium hirsutum
Gohir.D03G048800 Gossypium hirsutum
Gorai.003G050100 Gossypium raimondii
GSVIVG01026587001 Vitis vinifera
HanXRQChr15g0471661 Helianthus annuus
Haze_25192 Corylus avellana
Haze_25196 Corylus avellana
Haze_25197 Corylus avellana
HPP92_027450 Vanilla planifolia
Hund03424 Selenicereus undatus
Lalb_Chr12g0203321 Lupinus albus
Lj4g0006915 Lotus japonicus
Lsat_1_v5_gn_2_66720 Lactuca sativa
Manes.12G150300 Manihot esculenta
Mapoly0023s0156 Marchantia polymorpha
MBI09_g18622_MAGBIO Magnolia biondii
MBI09_g20115_MAGBIO Magnolia biondii
MD15G1343100 Malus domestica
Medtr8g092690 Medicago truncatula
Migut.H01113 Erythranthe guttata
MSTRG.2691 Avicennia marina
Nitab4.5_0002064g0030 Nicotiana tabacum
Nitab4.5_0010284g0020 Nicotiana tabacum
Nn1g06098 Nelumbo nucifera
Os01g0866600 Oryza sativa ssp. japonica
Peaxi162Scf00025g02217 Petunia axillaris
PGR119G2472 Punica granatum
Phvul.002G269100 Phaseolus vulgaris
Potri.001G309200 Populus trichocarpa
Pp3c4_15580 Physcomitrium patens
Prupe.6G162900 Prunus persica
Psat7g048720 Pisum sativum
PSO541G1601 Papaver somniferum
PSO675G6866 Papaver somniferum
QL06p051863 Quercus lobata
RcHm_v2.0_Chr2g0119151 Rosa chinensis
Sabra16G0195000 Salix brachista
SalBow1G8150 Salvia bowleyana
Sc16g0003960 Simmondsia chinensis
Sed0020530 Sechium edule
SEGI_33222 Sequoiadendron giganteum
SGA_v2.0_scaffold137G35109 Striga asiatica
SMO351G0462 Selaginella moellendorffii
Solyc11g005360.2 Solanum lycopersicum
Sopen11g001370 Solanum pennellii
Sp2g27750 Schrenkiella parvula
Sp6g33580 Schrenkiella parvula
TAR376G0498 Trochodendron aralioides
TAR381G0700 Trochodendron aralioides
THA.LOC104799431 Tarenaya hassleriana
THA.LOC104818466 Tarenaya hassleriana
Thecc.01G120800 Theobroma cacao
Thhalv10005190m.g Eutrema salsugineum
Thhalv10015138m.g Eutrema salsugineum
TPR.G2179 Trifolium pratense
TWI75G0630 Tripterygium wilfordii
unitig_0.g37 Utricularia gibba
Zm00001eb146740 Zea mays

User provided reference genes

Program Settings