Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19630 Brassica napus
A03p57910 Brassica napus
Aa31LG2G22070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis
Actinidia30487 Actinidia chinensis
Ah.04g154320 Amaranthus hybridus
AL7G24390 Arabidopsis lyrata
Aqoxy3G03603 Aquilegia oxysepala
Aqoxy3G03605 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea
AT4G28210 Arabidopsis thaliana
ATR0693G234 Amborella trichopoda
ATR0693G306 Amborella trichopoda
Atru.chr6.3069 Acer truncatum
AUR62037382 Chenopodium quinoa
AUR62044684 Chenopodium quinoa
BcaC06g32638 Brassica carinata
BcaC09g50505 Brassica carinata
BcaNung01588 Brassica carinata
BolC1t02415H Brassica oleracea
BolC7t46080H Brassica oleracea
BraA01t01896Z Brassica rapa
BraA03t14855Z Brassica rapa
C01p24650 Brassica napus
C07p56030 Brassica napus
CANSAT64G1157 Cannabis sativa
CARHR235920 Cardamine hirsuta
Carub.0007s1255 Capsella rubella
Ca_20697_v3 Cicer arietinum L.
Cc05_g06310 Coffea canephora
CDE12G0159 Ceratophyllum demersum
Cfa014546 Carpinus fangiana
Ciclev10015637m.g Citrus clementina
CiPaw.03G170000 Carya illinoinensis
ClCG01G000980 Citrullus lanatus
COL.COLO4_13687 Corchorus olitorius
Cpa.g.sc53.106 Carica papaya
Cpa.g.sc609.4 Carica papaya
CsaV3_5G001130 Cucumis sativus L.
CSS0012077 Camellia sinensis var. sinensis
CSS0047204 Camellia sinensis var. sinensis
DCAR_009726 Daucus carota
Dinv15489 Davidia involucrata
Duzib132G0607 Durio zibethinus
ECA246G1823 Erigeron canadensis
EL10Ac9g22343 Beta vulgaris
Eucgr.D00334 Eucalyptus grandis
FAN02G4118 Fragaria x ananassa
FAN05G2664 Fragaria x ananassa
FAN09G3443 Fragaria x ananassa
FAN14G5902 Fragaria x ananassa
FvH4_6g44760 Fragaria vesca
Glyma.06G298100 Glycine max
Glyma.12G107100 Glycine max
Gohir.A13G056900 Gossypium hirsutum
Gohir.D13G065000 Gossypium hirsutum
Gorai.013G073800 Gossypium raimondii
GSVIVG01030015001 Vitis vinifera
HanXRQChr06g0170991 Helianthus annuus
Haze_13090 Corylus avellana
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla
HPP92_002192 Vanilla planifolia
Hund08056 Selenicereus undatus
Lalb_Chr03g0029201 Lupinus albus
Lalb_Chr19g0135451 Lupinus albus
Lj3g0010136 Lotus japonicus
Lj8P117T42 Lonicera japonica
Lsat_1_v5_gn_3_39800 Lactuca sativa
Manes.13G151300 Manihot esculenta
MBI19_g29221_MAGBIO Magnolia biondii
MD09G1093800 Malus domestica
MD17G1083500 Malus domestica
MD17G1083600 Malus domestica
Medtr4g046023 Medicago truncatula
MELO3C005833.2 Cucumis melo
Migut.M00331 Erythranthe guttata
MSTRG.18638 Avicennia marina
Nitab4.5_0000635g0150 Nicotiana tabacum
Nitab4.5_0003195g0010 Nicotiana tabacum
Nn1g03886 Nelumbo nucifera
Oeu039864.1 Olea europaea
Peaxi162Scf00608g00317 Petunia axillaris
PGR042G0968 Punica granatum
PGSC0003DMG400029584 Solanum tuberosum
PGSC0003DMG401021671 Solanum tuberosum
Phvul.011G111800 Phaseolus vulgaris
Potri.013G146900 Populus trichocarpa
Prupe.3G231600 Prunus persica
Psat7g195960 Pisum sativum
PSO210G6334 Papaver somniferum
PSO832G2257 Papaver somniferum
QL08p037351 Quercus lobata
RcHm_v2.0_Chr2g0161911 Rosa chinensis
Sabra13G0118400 Salix brachista
SalBow7G0082 Salvia bowleyana
Sc21g0002460 Simmondsia chinensis
Sed0009072 Sechium edule
SEGI_04255 Sequoiadendron giganteum
SEGI_37556 Sequoiadendron giganteum
SGA_v2.0_scaffold70G23465 Striga asiatica
SMO300G0012 Selaginella moellendorffii
Solyc10g008600.3 Solanum lycopersicum
Sopen10g004420 Solanum pennellii
Sp7g26170 Schrenkiella parvula
TAR629G2913 Trochodendron aralioides
THA.LOC104807893 Tarenaya hassleriana
THA.LOC104825523 Tarenaya hassleriana
Thecc.02G172300 Theobroma cacao
Thhalv10025608m.g Eutrema salsugineum
TPR.G21667 Trifolium pratense
TWI36G0541 Tripterygium wilfordii
unitig_746.g26713 Utricularia gibba
VMungo1127G0570 Vigna mungo

User provided reference genes

Program Settings