Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p30760 Brassica napus
Aa31LG11G6580 Aethionema arabicum
Aa31LG11G6590 Aethionema arabicum
Actinidia29714 Actinidia chinensis
Ah.10g036300 Amaranthus hybridus
AL6G15400 Arabidopsis lyrata
Aqoxy7G01454 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.206LHF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M1P82G Arachis hypogaea
AT5G05510 Arabidopsis thaliana
ATR0174G052 Amborella trichopoda
Atru.chr12.81 Acer truncatum
AUR62012285 Chenopodium quinoa
AUR62022926 Chenopodium quinoa
BcaB07g31630 Brassica carinata
BcaC06g32263 Brassica carinata
BolC9t59886H Brassica oleracea
BraA10t45117Z Brassica rapa
C09p71250 Brassica napus
CAN.G19.13 Capsicum annuum
CANSAT56G1077 Cannabis sativa
CARHR207760 Cardamine hirsuta
Carub.0006s0441 Capsella rubella
Ca_15146_v3 Cicer arietinum L.
Cc01_g09710 Coffea canephora
Cc02_g06140 Coffea canephora
Cc10_g11800 Coffea canephora
CDE04G3666 Ceratophyllum demersum
Cfa001289 Carpinus fangiana
Ciclev10031128m.g Citrus clementina
CiPaw.02G194800 Carya illinoinensis
ClCG10G008640 Citrullus lanatus
COL.COLO4_25531 Corchorus olitorius
Cpa.g.sc19.145 Carica papaya
CsaV3_3G031030 Cucumis sativus L.
CSS0033429 Camellia sinensis var. sinensis
DCAR_011835 Daucus carota
Dinv10596 Davidia involucrata
Dinv21760 Davidia involucrata
Duzib106G1329 Durio zibethinus
ECA238G1086 Erigeron canadensis
EL10Ac2g04877 Beta vulgaris
Eucgr.I01149 Eucalyptus grandis
FAN01G2568 Fragaria x ananassa
FAN03G1846 Fragaria x ananassa
FAN10G2815 Fragaria x ananassa
FvH4_7g24900 Fragaria vesca
Glyma.11G232000 Glycine max
Glyma.18G025300 Glycine max
Gohir.A05G331300 Gossypium hirsutum
Gohir.D04G069900 Gossypium hirsutum
Gorai.012G078400 Gossypium raimondii
GSVIVG01032774001 Vitis vinifera
HanXRQChr14g0459411 Helianthus annuus
Haze_17259 Corylus avellana
Hma1.2p1_3227F.1_g334230 Hydrangea macrophylla
HPP92_019014 Vanilla planifolia
HPP92_019015 Vanilla planifolia
HPP92_019099 Vanilla planifolia
Hund13884 Selenicereus undatus
Lalb_Chr11g0075041 Lupinus albus
Lj1A959T84 Lonicera japonica
Lj6g0022014 Lotus japonicus
Lsat_1_v5_gn_2_124280 Lactuca sativa
Manes.10G009800 Manihot esculenta
MBI15_g40304_MAGBIO Magnolia biondii
MD01G1156700 Malus domestica
MD07G1225400 Malus domestica
Medtr3g071460 Medicago truncatula
MELO3C022702.2 Cucumis melo
Migut.F00655 Erythranthe guttata
MSTRG.27309 Avicennia marina
Nitab4.5_0000058g0210 Nicotiana tabacum
Nitab4.5_0000666g0110 Nicotiana tabacum
Nn2g10954 Nelumbo nucifera
Oeu056646.1 Olea europaea
Os11g0128700 Oryza sativa ssp. japonica
Os12g0125300 Oryza sativa ssp. japonica
Peaxi162Scf00029g00152 Petunia axillaris
Peaxi162Scf00133g00171 Petunia axillaris
Peaxi162Scf00284g00626 Petunia axillaris
Peaxi162Scf00329g00054 Petunia axillaris
PGR044G2446 Punica granatum
Phvul.001G245100 Phaseolus vulgaris
Potri.008G071900 Populus trichocarpa
Potri.010G185500 Populus trichocarpa
Prupe.2G254200 Prunus persica
Psat5g130320 Pisum sativum
PSO017G6917 Papaver somniferum
PSO349G0210 Papaver somniferum
QL08p063574 Quercus lobata
QL12p022210 Quercus lobata
RcHm_v2.0_Chr1g0370781 Rosa chinensis
Rhsim03G0145700 Rhododendron simsii
Sabra10G0142700 Salix brachista
Sabra15G0066700 Salix brachista
SalBow3G1191 Salvia bowleyana
Sc10g0002530 Simmondsia chinensis
Sed0020220 Sechium edule
SEGI_41288 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16664 Striga asiatica
Solyc06g051040.4 Solanum lycopersicum
Sopen06g016870 Solanum pennellii
Sp6g37340 Schrenkiella parvula
TAR623G0246 Trochodendron aralioides
TAR636G1205 Trochodendron aralioides
THA.LOC104816536 Tarenaya hassleriana
Thecc.10G012400 Theobroma cacao
Thhalv10013424m.g Eutrema salsugineum
TPR.G30153 Trifolium pratense
TWI73G0876 Tripterygium wilfordii
unitig_37.g11904 Utricularia gibba
vmacro06954 Vaccinium macrocarpon
vmacro17695 Vaccinium macrocarpon
VMungo1383G2116 Vigna mungo
Zm00001eb405420 Zea mays

User provided reference genes

Program Settings