Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p07900 Brassica napus
A08p33590 Brassica napus
Aa31LG1G3550 Aethionema arabicum
Actinidia24062 Actinidia chinensis
Ah.09g236070 Amaranthus hybridus
Ah.14g088940 Amaranthus hybridus
AL1G22260 Arabidopsis lyrata
Aqoxy7G03119 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EL94R1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G41NRI Arachis hypogaea
AT1G11240 Arabidopsis thaliana
ATR0580G203 Amborella trichopoda
Atru.chr10.2001 Acer truncatum
AUR62014725 Chenopodium quinoa
AUR62016906 Chenopodium quinoa
BcaC05g24986 Brassica carinata
BcaC05g24999 Brassica carinata
BcaC07g38645 Brassica carinata
BcaNung04470 Brassica carinata
BolC5t29692H Brassica oleracea
BolC8t49055H Brassica oleracea
BraA06t23989Z Brassica rapa
BraA08t35275Z Brassica rapa
C05p09500 Brassica napus
C08p14170 Brassica napus
CAN.G132.10 Capsicum annuum
CANSAT56G2140 Cannabis sativa
CARHR011470 Cardamine hirsuta
Carub.0001s1082 Capsella rubella
Ca_18489_v3 Cicer arietinum L.
Ca_29542_v3 Cicer arietinum L.
Cc02_g12510 Coffea canephora
CDE02G1625 Ceratophyllum demersum
Ciclev10016776m.g Citrus clementina
CiPaw.09G158500 Carya illinoinensis
ClCG04G003630 Citrullus lanatus
Cpa.g.c36644 Carica papaya
Cpa.g.sc27.115 Carica papaya
Cre03.g183500 Chlamydomonas reinhardtii
CsaV3_4G028920 Cucumis sativus L.
DCAR_008067 Daucus carota
Dinv40499 Davidia involucrata
ECA234G0685 Erigeron canadensis
EL10Ac8g20614 Beta vulgaris
Eucgr.D00710 Eucalyptus grandis
Eucgr.L03594 Eucalyptus grandis
FAN19G2227 Fragaria x ananassa
FAN23G1190 Fragaria x ananassa
FAN23G2525 Fragaria x ananassa
FAN25G0692 Fragaria x ananassa
FAN26G1405 Fragaria x ananassa
FAN28G0433 Fragaria x ananassa
FvH4_1g04320 Fragaria vesca
FvH4_3g04070 Fragaria vesca
FvH4_6g49491 Fragaria vesca
Glyma.07G190800 Glycine max
Glyma.08G058500 Glycine max
Gohir.A05G165200 Gossypium hirsutum
Gohir.D05G168200 Gossypium hirsutum
Gorai.009G173300 Gossypium raimondii
GSVIVG01003210001 Vitis vinifera
HanXRQChr17g0551071 Helianthus annuus
Hma1.2p1_0144F.1_g064740 Hydrangea macrophylla
HPP92_006711 Vanilla planifolia
Hund23624 Selenicereus undatus
Lalb_Chr16g0383411 Lupinus albus
Lj4g0003242 Lotus japonicus
Lsat_1_v5_gn_4_57121 Lactuca sativa
Manes.16G021000 Manihot esculenta
MD05G1325000 Malus domestica
MD10G1302800 Malus domestica
Medtr4g090910 Medicago truncatula
Migut.H01513 Erythranthe guttata
MSTRG.14679 Avicennia marina
Nitab4.5_0003223g0030 Nicotiana tabacum
Nitab4.5_0003223g0040 Nicotiana tabacum
Nitab4.5_0005936g0020 Nicotiana tabacum
Nn8g40519 Nelumbo nucifera
Oeu038228.1 Olea europaea
Os03g0353500 Oryza sativa ssp. japonica
Peaxi162Scf00371g01024 Petunia axillaris
PGR004G1238 Punica granatum
PGSC0003DMG402010824 Solanum tuberosum
Phvul.002G222700 Phaseolus vulgaris
Potri.004G035200 Populus trichocarpa
Potri.011G043400 Populus trichocarpa
Pp3c20_8900 Physcomitrium patens
Prupe.4G036300 Prunus persica
Psat7g109600 Pisum sativum
PSO063G2673 Papaver somniferum
PSO782G4966 Papaver somniferum
QL03p053069 Quercus lobata
QL05p081948 Quercus lobata
RcHm_v2.0_Chr5g0006551 Rosa chinensis
Rhsim02G0120100 Rhododendron simsii
Sabra04G0021000 Salix brachista
Sabra11G0030000 Salix brachista
SalBow7G0974 Salvia bowleyana
Sc05g0008060 Simmondsia chinensis
Sc05g0010000 Simmondsia chinensis
Sed0006938 Sechium edule
SEGI_26187 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37666 Striga asiatica
Sopen10g004990 Solanum pennellii
Sp1g09900 Schrenkiella parvula
TAR625G0841 Trochodendron aralioides
TAR636G2458 Trochodendron aralioides
THA.LOC104809549 Tarenaya hassleriana
Thecc.06G198400 Theobroma cacao
Thhalv10008794m.g Eutrema salsugineum
Thhalv10015657m.g Eutrema salsugineum
TPR.G32415 Trifolium pratense
TWI38G1087 Tripterygium wilfordii
unitig_8.g3353 Utricularia gibba
vmacro15868 Vaccinium macrocarpon
VMungo0251G2276 Vigna mungo
Zm00001eb394590 Zea mays

User provided reference genes

Program Settings