Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p05930 Brassica napus
Aa31LG10G9340 Aethionema arabicum
Actinidia05301 Actinidia chinensis
Actinidia13132 Actinidia chinensis
Ah.09g224140 Amaranthus hybridus
AL5G34670 Arabidopsis lyrata
Aqoxy3G03023 Aquilegia oxysepala
AT3G53700 Arabidopsis thaliana
ATR0559G329 Amborella trichopoda
ATR0661G162 Amborella trichopoda
Atru.BG.222.p Acer truncatum
Atru.chr8.1949 Acer truncatum
AUR62020014 Chenopodium quinoa
BcaB02g08515 Brassica carinata
BcaC02g09140 Brassica carinata
BolC4t25457H Brassica oleracea
BraA04t16297Z Brassica rapa
C04p38850 Brassica napus
CAN.G97.15 Capsicum annuum
CANSAT80G0660 Cannabis sativa
CARHR163610 Cardamine hirsuta
Carub.0005s2028 Capsella rubella
Ca_09611_v3 Cicer arietinum L.
Cc06_g02910 Coffea canephora
CDE04G3188 Ceratophyllum demersum
Cfa017422 Carpinus fangiana
Ciclev10013605m.g Citrus clementina
CiPaw.10G143400 Carya illinoinensis
ClCG04G008380 Citrullus lanatus
Cpa.g.sc312.1 Carica papaya
CsaV3_4G024770 Cucumis sativus L.
CSS0020348 Camellia sinensis var. sinensis
CSS0025676 Camellia sinensis var. sinensis
DCAR_009247 Daucus carota
Dinv35630 Davidia involucrata
Duzib128G0849 Durio zibethinus
ECA248G3443 Erigeron canadensis
EL10Ac8g18760 Beta vulgaris
Eucgr.K03156 Eucalyptus grandis
FAN05G0539 Fragaria x ananassa
FAN09G2819 Fragaria x ananassa
FAN14G2414 Fragaria x ananassa
FvH4_6g14250 Fragaria vesca
Glyma.10G043900 Glycine max
Glyma.13G131600 Glycine max
Gohir.A04G081000 Gossypium hirsutum
Gohir.D04G119700 Gossypium hirsutum
Gorai.012G101800 Gossypium raimondii
GSVIVG01025524001 Vitis vinifera
HanXRQChr01g0026741 Helianthus annuus
HanXRQChr11g0349291 Helianthus annuus
Haze_20748 Corylus avellana
HPP92_015528 Vanilla planifolia
Lalb_Chr02g0153051 Lupinus albus
Lj2C99T13 Lonicera japonica
Lj5g0004082 Lotus japonicus
Lsat_1_v5_gn_1_55640 Lactuca sativa
Manes.08G078400 Manihot esculenta
MBI14_g24311_MAGBIO Magnolia biondii
MD04G1122700 Malus domestica
MD12G1138900 Malus domestica
Medtr1g068960 Medicago truncatula
MELO3C003111.2 Cucumis melo
Migut.J00352 Erythranthe guttata
Migut.O00943 Erythranthe guttata
MSTRG.5682 Avicennia marina
Nitab4.5_0002077g0070 Nicotiana tabacum
Nitab4.5_0003267g0080 Nicotiana tabacum
Nn3g21911 Nelumbo nucifera
Nn8g40743 Nelumbo nucifera
Oeu049215.1 Olea europaea
Os03g0597200 Oryza sativa ssp. japonica
Os11g0133200 Oryza sativa ssp. japonica
PGR004G1128 Punica granatum
PGSC0003DMG400008927 Solanum tuberosum
Phvul.007G157700 Phaseolus vulgaris
Potri.004G013300 Populus trichocarpa
Prupe.6G250800 Prunus persica
Psat6g065880 Pisum sativum
Psat6g065920 Pisum sativum
PSO339G3203 Papaver somniferum
PSO648G0005 Papaver somniferum
QL05p010620 Quercus lobata
QL07p047413 Quercus lobata
RcHm_v2.0_Chr3g0467211 Rosa chinensis
Rhsim04G0155200 Rhododendron simsii
Rhsim04G0155400 Rhododendron simsii
Rhsim04G0155500 Rhododendron simsii
Rhsim04G0155600 Rhododendron simsii
Rhsim04G0155700 Rhododendron simsii
Rhsim04G0155800 Rhododendron simsii
Sabra04G0006200 Salix brachista
SalBow3G1315 Salvia bowleyana
Sc01g0004190 Simmondsia chinensis
Sed0013405 Sechium edule
SEGI_15105 Sequoiadendron giganteum
SEGI_37754 Sequoiadendron giganteum
SEGI_37919 Sequoiadendron giganteum
SGA_v2.0_scaffold126G33815 Striga asiatica
SGA_v2.0_scaffold126G33817 Striga asiatica
SGA_v2.0_scaffold135G34956 Striga asiatica
Solyc08g061180.1 Solanum lycopersicum
Solyc09g010450.1 Solanum lycopersicum
Sopen09g005190 Solanum pennellii
Sp5g08680 Schrenkiella parvula
TAR633G1621 Trochodendron aralioides
TAR636G1679 Trochodendron aralioides
THA.LOC104806571 Tarenaya hassleriana
Thecc.05G043800 Theobroma cacao
Thhalv10010142m.g Eutrema salsugineum
TPR.G25076 Trifolium pratense
TPR.G30959 Trifolium pratense
TPR.G39162 Trifolium pratense
TWI77G0080 Tripterygium wilfordii
vmacro08665 Vaccinium macrocarpon
VMungo0720G1504 Vigna mungo
Zm00001eb043060 Zea mays

User provided reference genes

Program Settings