Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p09120 Brassica napus
Aa31LG5G21960 Aethionema arabicum
Actinidia31405 Actinidia chinensis
Ah.14g084260 Amaranthus hybridus
AL4G32960 Arabidopsis lyrata
Aqoxy4G02722 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea
AT2G36740 Arabidopsis thaliana
ATR0081G022 Amborella trichopoda
Atru.chr12.2063 Acer truncatum
AUR62028393 Chenopodium quinoa
AUR62039766 Chenopodium quinoa
BcaB02g09334 Brassica carinata
BcaC02g11793 Brassica carinata
BolC4t22767H Brassica oleracea
BolC4t22783H Brassica oleracea
BraA05t19868Z Brassica rapa
C04p11290 Brassica napus
CAN.G186.71 Capsicum annuum
CARHR131100 Cardamine hirsuta
Carub.0004s1859 Capsella rubella
Ca_18207_v3 Cicer arietinum L.
CBR_g38961 Chara braunii
Cc02_g09110 Coffea canephora
CDE08G0956 Ceratophyllum demersum
Cfa024449 Carpinus fangiana
Ciclev10012044m.g Citrus clementina
CiPaw.07G182100 Carya illinoinensis
ClCG01G004860 Citrullus lanatus
Cpa.g.sc140.53 Carica papaya
Cre17.g728200 Chlamydomonas reinhardtii
CsaV3_5G005080 Cucumis sativus L.
CSS0010313 Camellia sinensis var. sinensis
DCAR_030020 Daucus carota
DCAR_030975 Daucus carota
Dinv25463 Davidia involucrata
ECA238G0057 Erigeron canadensis
EL10Ac8g18884 Beta vulgaris
Eucgr.K00107 Eucalyptus grandis
FAN01G0055 Fragaria x ananassa
FAN03G0535 Fragaria x ananassa
FAN10G1689 Fragaria x ananassa
FAN10G2743 Fragaria x ananassa
FAN28G2910 Fragaria x ananassa
FvH4_7g33430 Fragaria vesca
Glyma.05G136000 Glycine max
Gohir.A06G144633 Gossypium hirsutum
Gohir.D06G150400 Gossypium hirsutum
Gohir.D08G083500 Gossypium hirsutum
Gorai.004G087700 Gossypium raimondii
Gorai.010G175600 Gossypium raimondii
GSVIVG01024467001 Vitis vinifera
HanXRQChr07g0200571 Helianthus annuus
Haze_22241 Corylus avellana
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla
HPP92_000052 Vanilla planifolia
Hund18033 Selenicereus undatus
Lalb_Chr13g0293181 Lupinus albus
Lj4g0013326 Lotus japonicus
Lsat_1_v5_gn_2_107601 Lactuca sativa
Manes.09G119000 Manihot esculenta
Mapoly0001s0482 Marchantia polymorpha
MBI14_g11688_MAGBIO Magnolia biondii
MCO15G439 Micromonas commoda
MD07G1075300 Malus domestica
MD07G1304400 Malus domestica
MELO3C005447.2 Cucumis melo
Migut.F00816 Erythranthe guttata
MSTRG.4328 Avicennia marina
Nitab4.5_0000930g0060 Nicotiana tabacum
Nitab4.5_0002651g0040 Nicotiana tabacum
Nn6g34807 Nelumbo nucifera
Oeu033252.2 Olea europaea
Os08g0192400 Oryza sativa ssp. japonica
Peaxi162Scf00135g00913 Petunia axillaris
PGR142G0052 Punica granatum
PGSC0003DMG400025437 Solanum tuberosum
Phvul.002G186100 Phaseolus vulgaris
Potri.001G412800 Populus trichocarpa
Pp3c14_17650 Physcomitrium patens
PRCOL_00000609 Prasinoderma coloniale
Prupe.2G323000 Prunus persica
Psat7g087400 Pisum sativum
PSO339G0304 Papaver somniferum
PSO384G0326 Papaver somniferum
QL09p026702 Quercus lobata
RcHm_v2.0_Chr1g0383401 Rosa chinensis
Rhsim01G0067600 Rhododendron simsii
Rhsim09G0213900 Rhododendron simsii
Sabra16G0274600 Salix brachista
Sabra16G0274900 Salix brachista
SalBow3G4178 Salvia bowleyana
Sc08g0005450 Simmondsia chinensis
Sed0014561 Sechium edule
SEGI_10499 Sequoiadendron giganteum
SEGI_12666 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21307 Striga asiatica
SHI02510 Sapria himalayana
SHI02511 Sapria himalayana
SHI02512 Sapria himalayana
SMO165G0047 Selaginella moellendorffii
Solyc04g009830.3 Solanum lycopersicum
Sopen04g004970 Solanum pennellii
Sp4g19020 Schrenkiella parvula
TAR369G0178 Trochodendron aralioides
THA.LOC104805469 Tarenaya hassleriana
Thecc.06G017600 Theobroma cacao
Thhalv10016833m.g Eutrema salsugineum
TPR.G11931 Trifolium pratense
TPR.G34755 Trifolium pratense
TPR.G34759 Trifolium pratense
TPR.G8913 Trifolium pratense
TWI60G1635 Tripterygium wilfordii
unitig_747.g21800 Utricularia gibba
vmacro10779 Vaccinium macrocarpon
Zm00001eb260210 Zea mays

User provided reference genes

Program Settings