Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p11750 Brassica napus
A08p26290 Brassica napus
Aa31LG7G9990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2152 Anthoceros agrestis
Actinidia19564 Actinidia chinensis
Ah.02g131100 Amaranthus hybridus
Ah.03g135790 Amaranthus hybridus
AL1G40850 Arabidopsis lyrata
Aqoxy5G03235 Aquilegia oxysepala
AT1G27435 Arabidopsis thaliana
ATR0582G111 Amborella trichopoda
Atru.chr11.2397 Acer truncatum
AUR62005687 Chenopodium quinoa
AUR62028871 Chenopodium quinoa
BcaB03g13983 Brassica carinata
BcaC01g01613 Brassica carinata
BcaC01g06952 Brassica carinata
BcaC06g35293 Brassica carinata
BolC3t19669H Brassica oleracea
BolC7t42280H Brassica oleracea
BraA07t28960Z Brassica rapa
BraA08t34580Z Brassica rapa
C03p73770 Brassica napus
C07p17740 Brassica napus
CAN.G1264.4 Capsicum annuum
CANSAT01G1896 Cannabis sativa
CARHR027030 Cardamine hirsuta
Carub.0001s2598 Capsella rubella
Ca_06520_v3 Cicer arietinum L.
Cc11_g17420 Coffea canephora
CDE05G1244 Ceratophyllum demersum
Ciclev10033198m.g Citrus clementina
CiPaw.05G104600 Carya illinoinensis
CiPaw.06G106900 Carya illinoinensis
ClCG06G001860 Citrullus lanatus
CsaV3_6G007910 Cucumis sativus L.
CSS0038255 Camellia sinensis var. sinensis
CSS0039361 Camellia sinensis var. sinensis
DCAR_024641 Daucus carota
Dinv09126 Davidia involucrata
Dinv25633 Davidia involucrata
Dinv33305 Davidia involucrata
Duzib052G0936 Durio zibethinus
Duzib248G1150 Durio zibethinus
ECA232G0525 Erigeron canadensis
EL10Ac6g13573 Beta vulgaris
Eucgr.B03538 Eucalyptus grandis
FAN07G1762 Fragaria x ananassa
FAN12G2334 Fragaria x ananassa
FAN17G2783 Fragaria x ananassa
FvH4_4g23120 Fragaria vesca
Glyma.08G361800 Glycine max
Glyma.18G300000 Glycine max
Gohir.A04G101300 Gossypium hirsutum
Gohir.A06G101502 Gossypium hirsutum
Gohir.D02G113400 Gossypium hirsutum
Gohir.D04G140400 Gossypium hirsutum
Gohir.D07G189020 Gossypium hirsutum
Gorai.001G210600 Gossypium raimondii
Gorai.005G128300 Gossypium raimondii
Gorai.012G125400 Gossypium raimondii
GSVIVG01000942001 Vitis vinifera
HanXRQChr03g0067371 Helianthus annuus
Haze_11752 Corylus avellana
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla
HPP92_021628 Vanilla planifolia
HPP92_021686 Vanilla planifolia
Hund25491 Selenicereus undatus
Lalb_Chr10g0091171 Lupinus albus
Lj6A834T26 Lonicera japonica
LjContig00312_ERROPOS870357g0004846 Lotus japonicus
Lsat_1_v5_gn_4_1780 Lactuca sativa
Manes.04G090052 Manihot esculenta
Manes.11G080000 Manihot esculenta
Mapoly0027s0032 Marchantia polymorpha
MBI07_g24752_MAGBIO Magnolia biondii
MBI12_g28748_MAGBIO Magnolia biondii
MD13G1125100 Malus domestica
MD16G1125900 Malus domestica
Medtr3g074700 Medicago truncatula
MELO3C035240.2 Cucumis melo
Migut.K00992 Erythranthe guttata
MSTRG.471 Avicennia marina
Nitab4.5_0000913g0010 Nicotiana tabacum
Nn2g15930 Nelumbo nucifera
Oeu011334.1 Olea europaea
Oeu044483.1 Olea europaea
Peaxi162Scf00962g00024 Petunia axillaris
PGR119G0226 Punica granatum
PGSC0003DMG400011888 Solanum tuberosum
Phvul.008G000900 Phaseolus vulgaris
Potri.001G325000 Populus trichocarpa
Pp3c6_10000 Physcomitrium patens
Prupe.1G220300 Prunus persica
Psat0s1880g0200 Pisum sativum
PSO017G7113 Papaver somniferum
QL03p050754 Quercus lobata
RcHm_v2.0_Chr4g0429451 Rosa chinensis
Sabra16G0207500 Salix brachista
SalBow1G0427 Salvia bowleyana
SalBow2G1383 Salvia bowleyana
Sc11g0000250 Simmondsia chinensis
Sed0025765 Sechium edule
SGA_v2.0_scaffold9G04792 Striga asiatica
SHI04153 Sapria himalayana
Sopen01g005380 Solanum pennellii
Sp1g23670 Schrenkiella parvula
TAR629G2182 Trochodendron aralioides
THA.LOC104825479 Tarenaya hassleriana
Thecc.02G198000 Theobroma cacao
Thhalv10009236m.g Eutrema salsugineum
TPR.G15605 Trifolium pratense
TPR.G7690 Trifolium pratense
TWI75G1759 Tripterygium wilfordii
unitig_26.g10421 Utricularia gibba
Zm00001eb133070 Zea mays
Zm00001eb408880 Zea mays

User provided reference genes

Program Settings