Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p35030 Brassica napus
Aa31LG5G12650 Aethionema arabicum
Ah.12g062710 Amaranthus hybridus
AL3G11350 Arabidopsis lyrata
Aqoxy3G00507 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K9PA59 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PJ6ZH1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YR6PCG Arachis hypogaea
AT3G02120 Arabidopsis thaliana
ATR0177G043 Amborella trichopoda
Atru.chr8.430 Acer truncatum
AUR62018188 Chenopodium quinoa
AUR62038673 Chenopodium quinoa
BcaB07g32783 Brassica carinata
BcaC05g27151 Brassica carinata
BolC5t31777H Brassica oleracea
BraA09t39034Z Brassica rapa
C05p30380 Brassica napus
CANSAT64G2010 Cannabis sativa
CARHR076080 Cardamine hirsuta
Carub.0003s0123 Capsella rubella
Ca_04305_v3 Cicer arietinum L.
Cc07_g04230 Coffea canephora
CDE04G1794 Ceratophyllum demersum
Cfa007668 Carpinus fangiana
Ciclev10003349m.g Citrus clementina
Ciclev10003470m.g Citrus clementina
Ciclev10013137m.g Citrus clementina
Ciclev10027312m.g Citrus clementina
CiPaw.03G088500 Carya illinoinensis
ClCG07G016320 Citrullus lanatus
COL.COLO4_04934 Corchorus olitorius
Cpa.g.sc14.176 Carica papaya
CsaV3_4G009150 Cucumis sativus L.
CsaV3_5G014380 Cucumis sativus L.
DCAR_025431 Daucus carota
Dinv33828 Davidia involucrata
Dinv34941 Davidia involucrata
Duzib147G0673 Durio zibethinus
Duzib187G0261 Durio zibethinus
Duzib264G0735 Durio zibethinus
ECA238G0863 Erigeron canadensis
Eucgr.I02034 Eucalyptus grandis
FAN02G1963 Fragaria x ananassa
FAN05G2472 Fragaria x ananassa
FAN09G3572 Fragaria x ananassa
FAN14G0989 Fragaria x ananassa
FvH4_6g46850 Fragaria vesca
Glyma.01G085200 Glycine max
Glyma.13G056500 Glycine max
Glyma.19G030100 Glycine max
Gohir.A09G009600 Gossypium hirsutum
Gohir.A11G072700 Gossypium hirsutum
Gohir.D09G008650 Gossypium hirsutum
Gohir.D11G077000 Gossypium hirsutum
Gorai.006G010400 Gossypium raimondii
Gorai.007G082700 Gossypium raimondii
GSVIVG01032906001 Vitis vinifera
HanXRQChr07g0199771 Helianthus annuus
HanXRQChr09g0272731 Helianthus annuus
Haze_14430 Corylus avellana
Hma1.2p1_0481F.1_g162213 Hydrangea macrophylla
Hund13139 Selenicereus undatus
Lalb_Chr06g0174961 Lupinus albus
Lj2g0004633 Lotus japonicus
Lsat_1_v5_gn_2_90100 Lactuca sativa
Lsat_1_v5_gn_4_172620 Lactuca sativa
Manes.01G096000 Manihot esculenta
Manes.02G055100 Manihot esculenta
MBI16_g10826_MAGBIO Magnolia biondii
MD09G1066800 Malus domestica
MD17G1059700 Malus domestica
Medtr6g015260 Medicago truncatula
Medtr6g015280 Medicago truncatula
MELO3C024878.2 Cucumis melo
Migut.H00624 Erythranthe guttata
MSTRG.23884 Avicennia marina
MSTRG.2998 Avicennia marina
Nitab4.5_0003841g0040 Nicotiana tabacum
Nitab4.5_0007320g0040 Nicotiana tabacum
Nn1g08730 Nelumbo nucifera
Oeu062161.1 Olea europaea
Peaxi162Scf00025g00208 Petunia axillaris
Peaxi162Scf00166g00424 Petunia axillaris
Peaxi162Scf00202g00010 Petunia axillaris
Peaxi162Scf00254g00028 Petunia axillaris
Peaxi162Scf00271g00524 Petunia axillaris
Peaxi162Scf00298g00055 Petunia axillaris
Peaxi162Scf00329g00037 Petunia axillaris
PGR004G1649 Punica granatum
PGSC0003DMG400001358 Solanum tuberosum
Phvul.004G037300 Phaseolus vulgaris
Potri.004G120200 Populus trichocarpa
Potri.017G094200 Populus trichocarpa
Prupe.3G254900 Prunus persica
Psat1g068840 Pisum sativum
PSO017G6201 Papaver somniferum
QL02p067584 Quercus lobata
RcHm_v2.0_Chr2g0165841 Rosa chinensis
Rhsim10G0049600 Rhododendron simsii
Sabra17G0083000 Salix brachista
SalBow1G1386 Salvia bowleyana
SalBow1G4555 Salvia bowleyana
Sc14g0006330 Simmondsia chinensis
Sed0000045 Sechium edule
Sed0003732 Sechium edule
Solyc02g088830.4 Solanum lycopersicum
Sopen02g033540 Solanum pennellii
Sp3g01180 Schrenkiella parvula
TAR371G1018 Trochodendron aralioides
THA.LOC104822332 Tarenaya hassleriana
Thecc.04G095700 Theobroma cacao
TPR.G10007 Trifolium pratense
TWI34G0355 Tripterygium wilfordii
TWI60G1503 Tripterygium wilfordii
vmacro05638 Vaccinium macrocarpon
VMungo0464G1672 Vigna mungo

User provided reference genes

Program Settings