Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p06460 Brassica napus
Aa31LG11G14940 Aethionema arabicum
Actinidia05902 Actinidia chinensis
Actinidia36204 Actinidia chinensis
Actinidia36205 Actinidia chinensis
Ah.02g119990 Amaranthus hybridus
AL6G24810 Arabidopsis lyrata
Aqoxy5G03335 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea
AT5G14140 Arabidopsis thaliana
ATR0561G206 Amborella trichopoda
Atru.chr6.2581 Acer truncatum
AUR62003439 Chenopodium quinoa
AUR62029405 Chenopodium quinoa
BcaB01g05305 Brassica carinata
BcaB01g06341 Brassica carinata
BolC3t13247H Brassica oleracea
BraA03t09977Z Brassica rapa
C03p07460 Brassica napus
CAN.G473.102 Capsicum annuum
CANSAT64G0355 Cannabis sativa
CARHR199200 Cardamine hirsuta
Carub.0006s1234 Capsella rubella
Ca_22814_v3 Cicer arietinum L.
CBR_g26294 Chara braunii
Cc07_g00890 Coffea canephora
CDE05G3052 Ceratophyllum demersum
Cfa007222 Carpinus fangiana
Ciclev10016370m.g Citrus clementina
CiPaw.04G036900 Carya illinoinensis
ClCG11G007130 Citrullus lanatus
COL.COLO4_13265 Corchorus olitorius
Cpa.g.sc171.9 Carica papaya
CsaV3_2G034120 Cucumis sativus L.
CSS0001354 Camellia sinensis var. sinensis
CSS0033487 Camellia sinensis var. sinensis
DCAR_015107 Daucus carota
Dinv33333 Davidia involucrata
Duzib147G1327 Durio zibethinus
ECA238G1054 Erigeron canadensis
EL10Ac6g15414 Beta vulgaris
Eucgr.I01641 Eucalyptus grandis
FAN02G3703 Fragaria x ananassa
FAN09G4559 Fragaria x ananassa
FAN14G5463 Fragaria x ananassa
FAN23G0356 Fragaria x ananassa
FAN23G0458 Fragaria x ananassa
FvH4_6g53600 Fragaria vesca
Glyma.16G056000 Glycine max
Gohir.A07G228800 Gossypium hirsutum
Gohir.D07G235800 Gossypium hirsutum
Gorai.001G271700 Gossypium raimondii
GSVIVG01033083001 Vitis vinifera
HanXRQChr14g0450611 Helianthus annuus
Haze_14883 Corylus avellana
HPP92_022669 Vanilla planifolia
Lalb_Chr14g0363461 Lupinus albus
Lalb_Chr22g0360351 Lupinus albus
Lj1g0011001 Lotus japonicus
Lju41C53T12 Lonicera japonica
Lsat_1_v5_gn_2_93161 Lactuca sativa
Manes.15G161800 Manihot esculenta
Mapoly0041s0098 Marchantia polymorpha
MBI07_g39449_MAGBIO Magnolia biondii
MD09G1010100 Malus domestica
MD17G1000600 Malus domestica
Medtr7g029090 Medicago truncatula
Medtr7g029095 Medicago truncatula
MELO3C008189.2 Cucumis melo
Migut.K01467 Erythranthe guttata
MSTRG.3257 Avicennia marina
Nitab4.5_0002050g0060 Nicotiana tabacum
Nitab4.5_0009844g0010 Nicotiana tabacum
Nn3g16452 Nelumbo nucifera
Oeu005107.2 Olea europaea
Oeu005108.1 Olea europaea
Os11g0498400 Oryza sativa ssp. japonica
Peaxi162Scf00420g00554 Petunia axillaris
PGR142G3785 Punica granatum
PGSC0003DMG400020210 Solanum tuberosum
Phvul.001G093000 Phaseolus vulgaris
Potri.001G329300 Populus trichocarpa
Pp3c4_16130 Physcomitrium patens
Pp3c4_16200 Physcomitrium patens
PRCOL_00001512 Prasinoderma coloniale
Prupe.3G307100 Prunus persica
Psat3g178400 Pisum sativum
PSO017G0833 Papaver somniferum
PSO478G0882 Papaver somniferum
QL02p071231 Quercus lobata
RcHm_v2.0_Chr2g0175731 Rosa chinensis
Rhsim08G0042400 Rhododendron simsii
Sabra16G0210700 Salix brachista
SalBow7G1076 Salvia bowleyana
Sc03g0006490 Simmondsia chinensis
Sed0002550 Sechium edule
SEGI_11908 Sequoiadendron giganteum
SGA_v2.0_scaffold47G17597 Striga asiatica
SHI03949 Sapria himalayana
SMO367G0946 Selaginella moellendorffii
Solyc02g094170.3 Solanum lycopersicum
Sopen02g038800 Solanum pennellii
Sp6g29870 Schrenkiella parvula
SpUn0049_0070 Schrenkiella parvula
TAR371G0275 Trochodendron aralioides
TAR629G1038 Trochodendron aralioides
TAR629G1805 Trochodendron aralioides
THA.LOC104821122 Tarenaya hassleriana
Thecc.04G038000 Theobroma cacao
Thhalv10014409m.g Eutrema salsugineum
TPR.G38297 Trifolium pratense
TWI34G0743 Tripterygium wilfordii
TWI34G1534 Tripterygium wilfordii
vmacro18351 Vaccinium macrocarpon
VMungo1383G2452 Vigna mungo
Zm00001eb112900 Zea mays

User provided reference genes

Program Settings