Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p29280 Brassica napus
A06p46520 Brassica napus
Aa31LG9G7450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis
Actinidia14761 Actinidia chinensis
Actinidia18144 Actinidia chinensis
Ah.12g055650 Amaranthus hybridus
AL8G13090 Arabidopsis lyrata
Aqoxy3G02082 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea
AT5G45590 Arabidopsis thaliana
ATR0829G201 Amborella trichopoda
Atru.chr6.1576 Acer truncatum
BcaC03g16779 Brassica carinata
BcaC06g31539 Brassica carinata
BcaC06g34424 Brassica carinata
BolC2t10706H Brassica oleracea
BolC7t43404H Brassica oleracea
BraA02t07958Z Brassica rapa
BraA06t27526Z Brassica rapa
C02p46480 Brassica napus
C07p28660 Brassica napus
CANSAT21G2454 Cannabis sativa
CARHR176440 Cardamine hirsuta
Carub.0008s0244 Capsella rubella
Ca_25148_v3 Cicer arietinum L.
Cc08_g04080 Coffea canephora
CDE05G0418 Ceratophyllum demersum
CDE11G0569 Ceratophyllum demersum
Cfa012555 Carpinus fangiana
Ciclev10002495m.g Citrus clementina
CiPaw.12G070200 Carya illinoinensis
ClCG07G002300 Citrullus lanatus
COL.COLO4_16883 Corchorus olitorius
Cpa.g.c33846 Carica papaya
CsaV3_3G030390 Cucumis sativus L.
CSS0027486 Camellia sinensis var. sinensis
Dinv29039 Davidia involucrata
Duzib068G0693 Durio zibethinus
Duzib205G1866 Durio zibethinus
EL10Ac5g11986 Beta vulgaris
Eucgr.D02619 Eucalyptus grandis
FAN04G1681 Fragaria x ananassa
FAN08G3065 Fragaria x ananassa
FAN13G1224 Fragaria x ananassa
FAN18G3512 Fragaria x ananassa
FAN18G3946 Fragaria x ananassa
FvH4_5g23590 Fragaria vesca
Glyma.01G009800 Glycine max
Glyma.09G211300 Glycine max
Gohir.A08G152100 Gossypium hirsutum
Gohir.D08G173100 Gossypium hirsutum
Gorai.004G180500 Gossypium raimondii
GSVIVG01011544001 Vitis vinifera
HanXRQChr16g0510981 Helianthus annuus
Haze_08105 Corylus avellana
Haze_08111 Corylus avellana
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla
HPP92_025490 Vanilla planifolia
Hund14386 Selenicereus undatus
Lalb_Chr05g0215561 Lupinus albus
Lalb_Chr16g0380861 Lupinus albus
Lj2g0021598 Lotus japonicus
Lj7A129G17 Lonicera japonica
Lsat_1_v5_gn_3_43041 Lactuca sativa
Manes.17G011100 Manihot esculenta
Mapoly0025s0027 Marchantia polymorpha
MCO01G451 Micromonas commoda
MD00G1000200 Malus domestica
MD06G1023100 Malus domestica
Medtr5g027470 Medicago truncatula
MELO3C022766.2 Cucumis melo
Migut.E01333 Erythranthe guttata
MSTRG.13901 Avicennia marina
Nitab4.5_0000109g0180 Nicotiana tabacum
Nitab4.5_0005761g0030 Nicotiana tabacum
Nn1g01960 Nelumbo nucifera
Oeu044464.1 Olea europaea
Os10g0579500 Oryza sativa ssp. japonica
Peaxi162Scf00185g01627 Petunia axillaris
PGR031G1815 Punica granatum
PGSC0003DMG400020470 Solanum tuberosum
Phvul.002G132700 Phaseolus vulgaris
Potri.001G133600 Populus trichocarpa
Potri.003G099900 Populus trichocarpa
Pp3c9_12060 Physcomitrium patens
Prupe.5G024300 Prunus persica
Psat2g139680 Pisum sativum
PSO063G1678 Papaver somniferum
PSO782G2435 Papaver somniferum
QL12p000430 Quercus lobata
RcHm_v2.0_Chr1g0382651 Rosa chinensis
RcHm_v2.0_Chr7g0212891 Rosa chinensis
Rhsim07G0136500 Rhododendron simsii
Sabra01G0103300 Salix brachista
Sabra03G0067900 Salix brachista
SalBow4G1271 Salvia bowleyana
Sc01g0006090 Simmondsia chinensis
Sed0011128 Sechium edule
SEGI_22250 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31380 Striga asiatica
SGA_v2.0_scaffold144G35866 Striga asiatica
SHI45156 Sapria himalayana
Solyc06g066190.3 Solanum lycopersicum
Sopen06g024670 Solanum pennellii
Sp2g10480 Schrenkiella parvula
TAR629G1490 Trochodendron aralioides
THA.LOC104806179 Tarenaya hassleriana
Thecc.03G314400 Theobroma cacao
Thhalv10001052m.g Eutrema salsugineum
TPR.G9090 Trifolium pratense
TWI23G0606 Tripterygium wilfordii
unitig_0.g2213 Utricularia gibba
vmacro14218 Vaccinium macrocarpon
VMungo1215G2146 Vigna mungo
Zm00001eb025290 Zea mays

User provided reference genes

Program Settings