Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p06870 Brassica napus
Aa31LG10G7560 Aethionema arabicum
Actinidia07935 Actinidia chinensis
Ah.08g210170 Amaranthus hybridus
AL5G33230 Arabidopsis lyrata
Aqoxy4G02683 Aquilegia oxysepala
AT3G52520 Arabidopsis thaliana
ATR0124G041 Amborella trichopoda
ATR0772G099 Amborella trichopoda
Atru.chr8.1395 Acer truncatum
AUR62006268 Chenopodium quinoa
AUR62037038 Chenopodium quinoa
BcaB02g08564 Brassica carinata
BcaC02g09248 Brassica carinata
BolC4t25629H Brassica oleracea
BraA04t16387Z Brassica rapa
C04p40490 Brassica napus
CANSAT64G1977 Cannabis sativa
CARHR162280 Cardamine hirsuta
Carub.0005s1890 Capsella rubella
Ca_09043_v3 Cicer arietinum L.
CDE02G4309 Ceratophyllum demersum
CDE11G0740 Ceratophyllum demersum
Ciclev10013044m.g Citrus clementina
CiPaw.09G018900 Carya illinoinensis
CiPaw.10G015400 Carya illinoinensis
CiPaw.13G131800 Carya illinoinensis
ClCG10G018510 Citrullus lanatus
COL.COLO4_29613 Corchorus olitorius
Cpa.g.sc104.60 Carica papaya
Cpa.g.sc12.220 Carica papaya
CsaV3_3G037750 Cucumis sativus L.
CsaV3_6G040990 Cucumis sativus L.
Duzib106G0826 Durio zibethinus
Duzib128G0031 Durio zibethinus
ECA238G4730 Erigeron canadensis
EL10Ac7g16814 Beta vulgaris
FAN05G2500 Fragaria x ananassa
FAN05G3358 Fragaria x ananassa
FAN09G3456 Fragaria x ananassa
FAN14G4576 Fragaria x ananassa
FvH4_6g19940 Fragaria vesca
Glyma.02G198900 Glycine max
Glyma.03G200500 Glycine max
Glyma.10G078000 Glycine max
Glyma.19G198100 Glycine max
Gohir.A01G202400 Gossypium hirsutum
Gohir.D01G192400 Gossypium hirsutum
Gorai.002G236200 Gossypium raimondii
HanXRQChr13g0398221 Helianthus annuus
HanXRQChr15g0494731 Helianthus annuus
Hma1.2p1_1442F.1_g283790 Hydrangea macrophylla
Lalb_Chr20g0111461 Lupinus albus
Lj1g0011262 Lotus japonicus
Lsat_1_v5_gn_2_55301 Lactuca sativa
Lsat_1_v5_gn_5_87380 Lactuca sativa
Lsat_1_v5_gn_6_35120 Lactuca sativa
Manes.08G031500 Manihot esculenta
Manes.09G048400 Manihot esculenta
MBI01_g17601_MAGBIO Magnolia biondii
MBI17_g00990_MAGBIO Magnolia biondii
MD12G1037000 Malus domestica
MD14G1036000 Malus domestica
Medtr2g102560 Medicago truncatula
Medtr4g085050 Medicago truncatula
Medtr7g105820 Medicago truncatula
MELO3C009518.2 Cucumis melo
MELO3C024577.2 Cucumis melo
Migut.J00684 Erythranthe guttata
Migut.L01821 Erythranthe guttata
MSTRG.26609 Avicennia marina
Nitab4.5_0000020g0340 Nicotiana tabacum
Nitab4.5_0011425g0030 Nicotiana tabacum
Nn1g08119 Nelumbo nucifera
Nn2g14262 Nelumbo nucifera
Nn3g21654 Nelumbo nucifera
Nn4g22751 Nelumbo nucifera
Nn6g34756 Nelumbo nucifera
Oeu009304.1 Olea europaea
PGR004G0970 Punica granatum
PGSC0003DMG400016417 Solanum tuberosum
Phvul.007G269600 Phaseolus vulgaris
Potri.006G205200 Populus trichocarpa
Potri.016G072500 Populus trichocarpa
Psat3g030200 Pisum sativum
PSO339G3041 Papaver somniferum
PSO384G3916 Papaver somniferum
QL07p037475 Quercus lobata
RcHm_v2.0_Chr3g0488241 Rosa chinensis
Rhsim04G0129900 Rhododendron simsii
Rhsim07G0000400 Rhododendron simsii
Sabra06G0158200 Salix brachista
Sabra16G0075400 Salix brachista
SalBow1G5428 Salvia bowleyana
SalBow5G3820 Salvia bowleyana
SalBow6G0243 Salvia bowleyana
Sc20g0006630 Simmondsia chinensis
Sed0000741 Sechium edule
Sed0014477 Sechium edule
Sed0018559 Sechium edule
SHI12280 Sapria himalayana
Solyc01g007770.2 Solanum lycopersicum
Sopen01g003310 Solanum pennellii
Sp5g09790 Schrenkiella parvula
TAR268G0003 Trochodendron aralioides
TAR633G1261 Trochodendron aralioides
THA.LOC104799749 Tarenaya hassleriana
THA.LOC104816611 Tarenaya hassleriana
Thecc.05G100900 Theobroma cacao
Thecc.09G276100 Theobroma cacao
Thhalv10011026m.g Eutrema salsugineum
TPR.G18391 Trifolium pratense
TPR.G23353 Trifolium pratense
TWI53G1355 Tripterygium wilfordii
TWI77G0288 Tripterygium wilfordii
unitig_578.g16361 Utricularia gibba
VMungo0720G0028 Vigna mungo

User provided reference genes

Program Settings