Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p01520 Brassica napus
Aa31LG1G9720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3922 Anthoceros agrestis
Actinidia24342 Actinidia chinensis
Actinidia32224 Actinidia chinensis
AL1G12280 Arabidopsis lyrata
Aqoxy5G00741 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K3SJ5I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KXN2DA Arachis hypogaea
AT1G02870 Arabidopsis thaliana
ATR0796G034 Amborella trichopoda
Atru.chr5.1162 Acer truncatum
AUR62008650 Chenopodium quinoa
AUR62033118 Chenopodium quinoa
BcaB03g15758 Brassica carinata
BcaC05g24587 Brassica carinata
BcaC07g36990 Brassica carinata
BolC5t28931H Brassica oleracea
BolC8t46828H Brassica oleracea
BraA10t42428Z Brassica rapa
C05p01490 Brassica napus
C08p00260 Brassica napus
CAN.G339.16 Capsicum annuum
CANSAT25G1157 Cannabis sativa
CANSAT25G3267 Cannabis sativa
CARHR002210 Cardamine hirsuta
Carub.0001s0199 Capsella rubella
Ca_10345_v3 Cicer arietinum L.
CBR_g19096 Chara braunii
Cc09_g05510 Coffea canephora
CDE05G0468 Ceratophyllum demersum
CDE11G0846 Ceratophyllum demersum
Cfa005931 Carpinus fangiana
Ciclev10022428m.g Citrus clementina
CiPaw.07G107300 Carya illinoinensis
CiPaw.08G096300 Carya illinoinensis
ClCG09G005940 Citrullus lanatus
COL.COLO4_23360 Corchorus olitorius
Cre17.g726650 Chlamydomonas reinhardtii
CsaV3_7G029180 Cucumis sativus L.
CSS0020652 Camellia sinensis var. sinensis
CSS0035923 Camellia sinensis var. sinensis
DCAR_002824 Daucus carota
Dinv33046 Davidia involucrata
Duzib133G1442 Durio zibethinus
Duzib138G1907 Durio zibethinus
ECA236G5112 Erigeron canadensis
EL10Ac7g17459 Beta vulgaris
Eucgr.H01153 Eucalyptus grandis
FAN20G2591 Fragaria x ananassa
FAN24G1547 Fragaria x ananassa
FAN27G2794 Fragaria x ananassa
FvH4_2g25580 Fragaria vesca
Glyma.02G155400 Glycine max
Glyma.10G018900 Glycine max
Gohir.A08G101400 Gossypium hirsutum
Gohir.D08G084900 Gossypium hirsutum
Gorai.004G089300 Gossypium raimondii
GSVIVG01027991001 Vitis vinifera
HanXRQChr06g0163831 Helianthus annuus
Haze_04913 Corylus avellana
Hma1.2p1_0491F.1_g164460 Hydrangea macrophylla
HPP92_013720 Vanilla planifolia
Hund18131 Selenicereus undatus
Lalb_Chr18g0047051 Lupinus albus
Lj1g0003126 Lotus japonicus
Lj2A1192T47 Lonicera japonica
Lsat_1_v5_gn_8_53460 Lactuca sativa
Manes.05G063100 Manihot esculenta
Mapoly0043s0113 Marchantia polymorpha
MBI19_g13201_MAGBIO Magnolia biondii
MCO15G582 Micromonas commoda
MD03G1286500 Malus domestica
MD05G1198200 Malus domestica
MD11G1313700 Malus domestica
Medtr1g088670 Medicago truncatula
MELO3C016009.2 Cucumis melo
Migut.D00207 Erythranthe guttata
MSTRG.18162 Avicennia marina
Nitab4.5_0000119g0320 Nicotiana tabacum
Nitab4.5_0002469g0070 Nicotiana tabacum
Nitab4.5_0011307g0010 Nicotiana tabacum
Nn3g21461 Nelumbo nucifera
Oeu032105.1 Olea europaea
Os05g0367100 Oryza sativa ssp. japonica
Peaxi162Scf00001g00482 Petunia axillaris
PGR119G1195 Punica granatum
PGR119G1688 Punica granatum
PGSC0003DMG400011375 Solanum tuberosum
Phvul.007G143800 Phaseolus vulgaris
Potri.014G130400 Populus trichocarpa
Pp3c25_320 Physcomitrium patens
Prupe.8G259900 Prunus persica
Psat1g156280 Pisum sativum
Psat6g165000 Pisum sativum
PSO210G5360 Papaver somniferum
PSO832G2873 Papaver somniferum
QL12p027406 Quercus lobata
RcHm_v2.0_Chr2g0134071 Rosa chinensis
RcHm_v2.0_Chr6g0293791 Rosa chinensis
Sabra14G0097000 Salix brachista
SalBow3G3208 Salvia bowleyana
Sc05g0003970 Simmondsia chinensis
Sed0022553 Sechium edule
Solyc09g075030.3 Solanum lycopersicum
Sopen09g029850 Solanum pennellii
Sp1g01860 Schrenkiella parvula
TAR633G1007 Trochodendron aralioides
THA.LOC104801274 Tarenaya hassleriana
THA.LOC104815930 Tarenaya hassleriana
Thecc.01G298700 Theobroma cacao
Thhalv10008837m.g Eutrema salsugineum
TWI14G0013 Tripterygium wilfordii
unitig_0.g659 Utricularia gibba
vmacro02459 Vaccinium macrocarpon
VMungo0720G2524 Vigna mungo
Zm00001eb285510 Zea mays

User provided reference genes

Program Settings