Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p10410 Brassica napus
Aa31LG9G15370 Aethionema arabicum
Actinidia09224 Actinidia chinensis
Actinidia14818 Actinidia chinensis
Ah.12g054700 Amaranthus hybridus
AL4G31410 Arabidopsis lyrata
Aqoxy3G02463 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea
AT2G35360 Arabidopsis thaliana
ATR0049G013 Amborella trichopoda
Atru.BG.44.p Acer truncatum
AUR62007255 Chenopodium quinoa
AUR62018744 Chenopodium quinoa
BcaB02g09437 Brassica carinata
BcaC02g11640 Brassica carinata
BolC4t22928H Brassica oleracea
BraA05t19976Z Brassica rapa
C04p12840 Brassica napus
CAN.G845.34 Capsicum annuum
CANSAT21G0325 Cannabis sativa
CARHR129520 Cardamine hirsuta
Carub.0004s1705 Capsella rubella
Ca_22062_v3 Cicer arietinum L.
CBR_g57857 Chara braunii
Cc08_g02400 Coffea canephora
CDE12G0071 Ceratophyllum demersum
Cfa012408 Carpinus fangiana
Ciclev10032685m.g Citrus clementina
CiPaw.11G090800 Carya illinoinensis
ClCG10G001830 Citrullus lanatus
COL.COLO4_17076 Corchorus olitorius
Cpa.g.sc90.59 Carica papaya
Cre12.g533400 Chlamydomonas reinhardtii
CsaV3_3G001910 Cucumis sativus L.
CSS0014670 Camellia sinensis var. sinensis
CSS0041220 Camellia sinensis var. sinensis
DCAR_008287 Daucus carota
Dinv25198 Davidia involucrata
Dinv28930 Davidia involucrata
Duzib068G0493 Durio zibethinus
Duzib205G0961 Durio zibethinus
ECA233G2855 Erigeron canadensis
EL10Ac5g12163 Beta vulgaris
Eucgr.D02180 Eucalyptus grandis
FAN04G0264 Fragaria x ananassa
FAN08G0129 Fragaria x ananassa
FAN13G1018 Fragaria x ananassa
FAN18G0349 Fragaria x ananassa
FvH4_5g21620 Fragaria vesca
Glyma.05G113600 Glycine max
Glyma.17G153700 Glycine max
Gohir.A01G114301 Gossypium hirsutum
Gohir.A03G002100 Gossypium hirsutum
Gohir.A09G039700 Gossypium hirsutum
Gohir.A12G209800 Gossypium hirsutum
Gohir.D03G170200 Gossypium hirsutum
Gohir.D12G212500 Gossypium hirsutum
Gorai.003G180500 Gossypium raimondii
Gorai.008G228100 Gossypium raimondii
GSVIVG01013176001 Vitis vinifera
HanXRQChr10g0291701 Helianthus annuus
HanXRQChr16g0511531 Helianthus annuus
HanXRQChr16g0517491 Helianthus annuus
Haze_08270 Corylus avellana
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla
HPP92_027725 Vanilla planifolia
HPP92_028475 Vanilla planifolia
Lalb_Chr09g0329521 Lupinus albus
Lj2A243G18 Lonicera japonica
Lj4g0014575 Lotus japonicus
Lsat_1_v5_gn_8_112001 Lactuca sativa
Manes.17G013800 Manihot esculenta
MCO13G047 Micromonas commoda
MD06G1031100 Malus domestica
Medtr4g098640 Medicago truncatula
MELO3C013865.2 Cucumis melo
Migut.A01006 Erythranthe guttata
MSTRG.12154 Avicennia marina
Nitab4.5_0000535g0140 Nicotiana tabacum
Nitab4.5_0007026g0050 Nicotiana tabacum
Nn6g33632 Nelumbo nucifera
Os09g0573100 Oryza sativa ssp. japonica
Peaxi162Scf00102g00630 Petunia axillaris
PGSC0003DMG400020500 Solanum tuberosum
Phvul.003G229300 Phaseolus vulgaris
Potri.003G089400 Populus trichocarpa
Pp3c1_27050 Physcomitrium patens
PRCOL_00000188 Prasinoderma coloniale
Prupe.5G041200 Prunus persica
Psat4g079280 Pisum sativum
PSO063G6338 Papaver somniferum
PSO782G3300 Papaver somniferum
QL12p006269 Quercus lobata
QL12p006401 Quercus lobata
RcHm_v2.0_Chr7g0209081 Rosa chinensis
Rhsim07G0124500 Rhododendron simsii
Sabra03G0059200 Salix brachista
SalBow6G5529 Salvia bowleyana
Sc07g0008780 Simmondsia chinensis
Sed0027053 Sechium edule
SEGI_11276 Sequoiadendron giganteum
SGA_v2.0_scaffold198G41105 Striga asiatica
Solyc08g007030.3 Solanum lycopersicum
Sopen08g002990 Solanum pennellii
Sp4g17580 Schrenkiella parvula
TAR629G3318 Trochodendron aralioides
THA.LOC104807964 Tarenaya hassleriana
Thecc.03G231500 Theobroma cacao
Thhalv10017211m.g Eutrema salsugineum
TPR.G28655 Trifolium pratense
TWI60G1564 Tripterygium wilfordii
vmacro14159 Vaccinium macrocarpon
VMungo0251G0361 Vigna mungo
Zm00001eb307090 Zea mays

User provided reference genes

Program Settings