Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p12420 Brassica napus
Aa31LG9G16400 Aethionema arabicum
Actinidia17852 Actinidia chinensis
Ah.01g020130 Amaranthus hybridus
AL7G50600 Arabidopsis lyrata
Aqoxy6G01416 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3PJ361 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U9N0YZ Arachis hypogaea
AT5G39710 Arabidopsis thaliana
ATR0043G014 Amborella trichopoda
ATR0043G025 Amborella trichopoda
ATR0594G023 Amborella trichopoda
ATR0594G223 Amborella trichopoda
ATR1120G070 Amborella trichopoda
Atru.chr5.2775 Acer truncatum
AUR62011433 Chenopodium quinoa
AUR62016628 Chenopodium quinoa
BcaB06g27361 Brassica carinata
BcaB06g27362 Brassica carinata
BolC4t26195H Brassica oleracea
BraA04t16905Z Brassica rapa
C04p46110 Brassica napus
CAN.G322.18 Capsicum annuum
CAN.G322.19 Capsicum annuum
CANSAT25G3187 Cannabis sativa
CARHR262550 Cardamine hirsuta
Carub.0007s3617 Capsella rubella
Carub.0007s3618 Capsella rubella
Carub.0007s3621 Capsella rubella
Carub.0007s3622 Capsella rubella
Ca_12460_v3 Cicer arietinum L.
Ca_29767_v3 Cicer arietinum L.
CDE09G0572 Ceratophyllum demersum
Cfa005452 Carpinus fangiana
Ciclev10028118m.g Citrus clementina
CiPaw.06G142100 Carya illinoinensis
ClCG02G005770 Citrullus lanatus
COL.COLO4_32688 Corchorus olitorius
Cpa.g.c47004 Carica papaya
Cpa.g.sc62.38 Carica papaya
CsaV3_7G008750 Cucumis sativus L.
CSS0006454 Camellia sinensis var. sinensis
CSS0049463 Camellia sinensis var. sinensis
DCAR_022059 Daucus carota
Dinv23584 Davidia involucrata
Duzib132G0284 Durio zibethinus
ECA234G1772 Erigeron canadensis
EL10Ac9g21827 Beta vulgaris
Eucgr.I01171 Eucalyptus grandis
FAN15G2218 Fragaria x ananassa
FAN20G2333 Fragaria x ananassa
FAN24G1409 Fragaria x ananassa
FAN27G2753 Fragaria x ananassa
FvH4_2g06720 Fragaria vesca
Glyma.20G010100 Glycine max
Gohir.A03G191600 Gossypium hirsutum
Gohir.D02G212500 Gossypium hirsutum
Gorai.005G240500 Gossypium raimondii
GSVIVG01031787001 Vitis vinifera
GSVIVG01031788001 Vitis vinifera
HanXRQChr10g0303231 Helianthus annuus
Haze_01905 Corylus avellana
HPP92_006001 Vanilla planifolia
Lalb_Chr10g0095481 Lupinus albus
Lj2g0007949 Lotus japonicus
Lj9A359T74 Lonicera japonica
Lsat_1_v5_gn_5_113361 Lactuca sativa
Manes.17G093600 Manihot esculenta
MD10G1090200 Malus domestica
Medtr1g033960 Medicago truncatula
MELO3C018437.2 Cucumis melo
Migut.N01200 Erythranthe guttata
MSTRG.27720 Avicennia marina
Nitab4.5_0004334g0100 Nicotiana tabacum
Nitab4.5_0005583g0010 Nicotiana tabacum
Nn4g22909 Nelumbo nucifera
Oeu007259.1 Olea europaea
Oeu013687.1 Olea europaea
Os06g0152500 Oryza sativa ssp. japonica
Peaxi162Scf00016g00164 Petunia axillaris
PGR142G0738 Punica granatum
PGSC0003DMG401025809 Solanum tuberosum
PGSC0003DMG402025785 Solanum tuberosum
Phvul.003G012700 Phaseolus vulgaris
Potri.009G105600 Populus trichocarpa
Prupe.7G039700 Prunus persica
Prupe.8G118500 Prunus persica
Psat6g096520 Pisum sativum
QL11p037400 Quercus lobata
RcHm_v2.0_Chr6g0258901 Rosa chinensis
RcHm_v2.0_Chr7g0233231 Rosa chinensis
RcHm_v2.0_Chr7g0233241 Rosa chinensis
Rhsim05G0081400 Rhododendron simsii
Sabra09G0080800 Salix brachista
Sc08g0000040 Simmondsia chinensis
Sed0026070 Sechium edule
SEGI_33508 Sequoiadendron giganteum
SEGI_41511 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06572 Striga asiatica
SHI05381 Sapria himalayana
Solyc01g108410.3 Solanum lycopersicum
Sopen01g050630 Solanum pennellii
Sp7g02300 Schrenkiella parvula
TAR628G1172 Trochodendron aralioides
TAR633G1560 Trochodendron aralioides
TAR633G1647 Trochodendron aralioides
THA.LOC104804370 Tarenaya hassleriana
Thecc.02G097300 Theobroma cacao
Thhalv10027654m.g Eutrema salsugineum
TPR.G11140 Trifolium pratense
TPR.G40260 Trifolium pratense
TPR.G6774 Trifolium pratense
TWI31G0517 Tripterygium wilfordii
vmacro13394 Vaccinium macrocarpon
VMungo1215G0504 Vigna mungo
Zm00001eb348200 Zea mays
Zm00001eb376700 Zea mays

User provided reference genes

Program Settings