Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p16520 Brassica napus
Aa31LG9G4440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis
Actinidia35816 Actinidia chinensis
Ah.04g153670 Amaranthus hybridus
AL9U10380 Arabidopsis lyrata
Aqoxy2G03746 Aquilegia oxysepala
Aqoxy7G02302 Aquilegia oxysepala
Aqoxy7G02465 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea
AT4G13330 Arabidopsis thaliana
ATR0787G032 Amborella trichopoda
ATR0787G039 Amborella trichopoda
Atru.chr4.1915 Acer truncatum
AUR62015271 Chenopodium quinoa
AUR62018068 Chenopodium quinoa
BcaC08g44309 Brassica carinata
BcaC08g44310 Brassica carinata
BolC6t36929H Brassica oleracea
BraA05t20557Z Brassica rapa
C06p17330 Brassica napus
CAN.G524.29 Capsicum annuum
CANSAT78G0655 Cannabis sativa
CARHR218870 Cardamine hirsuta
Carub.0007s2931 Capsella rubella
Ca_17963_v3 Cicer arietinum L.
Cc03_g06310 Coffea canephora
CDE02G1483 Ceratophyllum demersum
CDE08G1596 Ceratophyllum demersum
Cfa014781 Carpinus fangiana
Ciclev10005032m.g Citrus clementina
CiPaw.02G107000 Carya illinoinensis
ClCG05G004000 Citrullus lanatus
COL.COLO4_15963 Corchorus olitorius
Cpa.g.sc44.1 Carica papaya
CsaV3_3G011690 Cucumis sativus L.
CSS0034732 Camellia sinensis var. sinensis
Dinv27112 Davidia involucrata
Duzib151G0230 Durio zibethinus
ECA234G1558 Erigeron canadensis
EL10Ac3g06657 Beta vulgaris
Eucgr.H00127 Eucalyptus grandis
FAN13G3085 Fragaria x ananassa
FAN17G2805 Fragaria x ananassa
FvH4_4g04570 Fragaria vesca
FvH4_5g26950 Fragaria vesca
Glyma.10G132600 Glycine max
Gohir.D10G158400 Gossypium hirsutum
Gorai.011G177900 Gossypium raimondii
GSVIVG01027915001 Vitis vinifera
HanXRQChr06g0182801 Helianthus annuus
HanXRQChr11g0332551 Helianthus annuus
HanXRQChr17g0562081 Helianthus annuus
Haze_11458 Corylus avellana
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla
Hund20529 Selenicereus undatus
Lalb_Chr03g0036951 Lupinus albus
Lj6C621T18 Lonicera japonica
Lj6g0000537 Lotus japonicus
Lsat_1_v5_gn_2_41360 Lactuca sativa
Manes.03G158900 Manihot esculenta
Mapoly0127s0023 Marchantia polymorpha
MBI10_g35430_MAGBIO Magnolia biondii
MBI10_g35432_MAGBIO Magnolia biondii
MBI10_g35433_MAGBIO Magnolia biondii
MBI10_g35434_MAGBIO Magnolia biondii
MCO07G483 Micromonas commoda
MCO09G143 Micromonas commoda
MD07G1289900 Malus domestica
MD13G1221100 Malus domestica
MD16G1226200 Malus domestica
Medtr8g085480 Medicago truncatula
MELO3C006377.2 Cucumis melo
Migut.G00555 Erythranthe guttata
MSTRG.4172 Avicennia marina
Nitab4.5_0000194g0200 Nicotiana tabacum
Nitab4.5_0013063g0010 Nicotiana tabacum
Nn1g02958 Nelumbo nucifera
Oeu002936.2 Olea europaea
Os04g0510700 Oryza sativa ssp. japonica
Peaxi162Scf00153g01846 Petunia axillaris
PGR031G1141 Punica granatum
PGR031G1585 Punica granatum
PGSC0003DMG400017145 Solanum tuberosum
Phvul.007G231500 Phaseolus vulgaris
Potri.008G171900 Populus trichocarpa
Pp3c15_24290 Physcomitrium patens
Prupe.1G048100 Prunus persica
Psat7g076560 Pisum sativum
PSO017G4333 Papaver somniferum
PSO063G2784 Papaver somniferum
QL06p021004 Quercus lobata
RcHm_v2.0_Chr4g0395361 Rosa chinensis
Rhsim04G0172300 Rhododendron simsii
Sabra08G0131200 Salix brachista
SalBow3G1529 Salvia bowleyana
Sc19g0005530 Simmondsia chinensis
Sed0022275 Sechium edule
SEGI_21065 Sequoiadendron giganteum
SGA_v2.0_scaffold67G22686 Striga asiatica
SHI00774 Sapria himalayana
Solyc09g090690.4 Solanum lycopersicum
Sopen09g033630 Solanum pennellii
Sp7g10880 Schrenkiella parvula
TAR362G0064 Trochodendron aralioides
THA.LOC104804575 Tarenaya hassleriana
Thecc.04G264000 Theobroma cacao
Thhalv10026810m.g Eutrema salsugineum
TPR.G11804 Trifolium pratense
TPR.G25294 Trifolium pratense
TWI09G0838 Tripterygium wilfordii
unitig_748.g8297 Utricularia gibba
unitig_748.g8298 Utricularia gibba
vmacro08554 Vaccinium macrocarpon
VMungo0720G0849 Vigna mungo
Zm00001eb077400 Zea mays

User provided reference genes

Program Settings