Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p42230 Brassica napus
Aa31LG2G6230 Aethionema arabicum
Actinidia15119 Actinidia chinensis
Actinidia37455 Actinidia chinensis
Ah.02g130370 Amaranthus hybridus
AL5G14830 Arabidopsis lyrata
Aqoxy3G00656 Aquilegia oxysepala
Aqoxy3G01366 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.74BAAJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FYV5AX Arachis hypogaea
AT3G26115 Arabidopsis thaliana
ATR0796G133 Amborella trichopoda
Atru.chr11.2187 Acer truncatum
AUR62005523 Chenopodium quinoa
AUR62024216 Chenopodium quinoa
BcaC06g31090 Brassica carinata
BcaC06g33927 Brassica carinata
BolC7t44041H Brassica oleracea
BraA06t27139Z Brassica rapa
C07p35130 Brassica napus
CAN.G379.20 Capsicum annuum
CANSAT01G1415 Cannabis sativa
CARHR147120 Cardamine hirsuta
Carub.0005s0400 Capsella rubella
Carub.0005s0511 Capsella rubella
Ca_25129_v3 Cicer arietinum L.
Cc11_g16140 Coffea canephora
CDE02G0600 Ceratophyllum demersum
Ciclev10031545m.g Citrus clementina
CiPaw.05G176800 Carya illinoinensis
ClCG05G026110 Citrullus lanatus
COL.COLO4_23530 Corchorus olitorius
Cpa.g.sc33.79 Carica papaya
Cre01.g031850 Chlamydomonas reinhardtii
Cre01.g031875 Chlamydomonas reinhardtii
CsaV3_5G030740 Cucumis sativus L.
CSS0002421 Camellia sinensis var. sinensis
CSS0015338 Camellia sinensis var. sinensis
CSS0027349 Camellia sinensis var. sinensis
CSS0040008 Camellia sinensis var. sinensis
Dinv14753 Davidia involucrata
Duzib248G0606 Durio zibethinus
ECA233G3820 Erigeron canadensis
EL10As2g23185 Beta vulgaris
Eucgr.H02451 Eucalyptus grandis
FAN07G2733 Fragaria x ananassa
FAN08G1400 Fragaria x ananassa
FAN08G3042 Fragaria x ananassa
FAN12G0810 Fragaria x ananassa
FAN14G3171 Fragaria x ananassa
FAN15G2953 Fragaria x ananassa
FAN17G2133 Fragaria x ananassa
FAN18G3688 Fragaria x ananassa
FAN22G2334 Fragaria x ananassa
FAN23G2199 Fragaria x ananassa
FvH4_4g25240 Fragaria vesca
Glyma.11G244400 Glycine max
Gohir.A12G146000 Gossypium hirsutum
Gohir.D12G150600 Gossypium hirsutum
Gorai.008G162100 Gossypium raimondii
GSVIVG01000584001 Vitis vinifera
HanXRQChr12g0371791 Helianthus annuus
Haze_12292 Corylus avellana
HPP92_023148 Vanilla planifolia
Hund25410 Selenicereus undatus
Lalb_Chr11g0075551 Lupinus albus
Lj3A1062T101 Lonicera japonica
Lj6g0028045 Lotus japonicus
Lsat_1_v5_gn_8_153661 Lactuca sativa
Manes.12G019600 Manihot esculenta
Mapoly0058s0079 Marchantia polymorpha
MBI01_g24433_MAGBIO Magnolia biondii
MBI19_g16323_MAGBIO Magnolia biondii
MD13G1105700 Malus domestica
Medtr3g086360 Medicago truncatula
MELO3C011916.2 Cucumis melo
Migut.K00633 Erythranthe guttata
MSTRG.548 Avicennia marina
Nitab4.5_0000718g0180 Nicotiana tabacum
Nitab4.5_0015117g0010 Nicotiana tabacum
Nn3g16630 Nelumbo nucifera
Os01g0695600 Oryza sativa ssp. japonica
Peaxi162Scf00050g00819 Petunia axillaris
PGR083G2447 Punica granatum
PGSC0003DMG400022710 Solanum tuberosum
Phvul.001G256400 Phaseolus vulgaris
Potri.010G051200 Populus trichocarpa
Pp3c22_21870 Physcomitrium patens
Prupe.1G240700 Prunus persica
Psat5g092640 Pisum sativum
PSO210G7557 Papaver somniferum
PSO478G2928 Papaver somniferum
QL03p056156 Quercus lobata
QL03p056162 Quercus lobata
RcHm_v2.0_Chr4g0432431 Rosa chinensis
SalBow2G0666 Salvia bowleyana
Sc11g0000830 Simmondsia chinensis
Sed0018660 Sechium edule
SEGI_08498 Sequoiadendron giganteum
SEGI_15055 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29585 Striga asiatica
SMO203G0059 Selaginella moellendorffii
SMO203G0085 Selaginella moellendorffii
SMO203G0223 Selaginella moellendorffii
SMO327G0033 Selaginella moellendorffii
SMO327G0043 Selaginella moellendorffii
Solyc01g008900.4 Solanum lycopersicum
Sopen01g004390 Solanum pennellii
Sp2g15320 Schrenkiella parvula
TAR629G1507 Trochodendron aralioides
THA.LOC104825678 Tarenaya hassleriana
Thecc.02G266900 Theobroma cacao
Thhalv10004274m.g Eutrema salsugineum
TPR.G5676 Trifolium pratense
TWI75G0344 Tripterygium wilfordii
vmacro16160 Vaccinium macrocarpon
Zm00001eb155910 Zea mays

User provided reference genes

Program Settings