Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG2G21380 Aethionema arabicum
Actinidia06966 Actinidia chinensis
Actinidia13010 Actinidia chinensis
Ah.06g194580 Amaranthus hybridus
AL7G23370 Arabidopsis lyrata
Aqoxy1G00367 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea
AT4G29070 Arabidopsis thaliana
ATR0745G042 Amborella trichopoda
Atru.chr3.2891 Acer truncatum
AUR62000194 Chenopodium quinoa
AUR62006544 Chenopodium quinoa
BcaB03g12596 Brassica carinata
BcaC07g38376 Brassica carinata
BcaC09g51693 Brassica carinata
BolC1t01003H Brassica oleracea
BolC8t48803H Brassica oleracea
C08p11310 Brassica napus
CAN.G64.14 Capsicum annuum
CANSAT54G0445 Cannabis sativa
CARHR236810 Cardamine hirsuta
Carub.0007s1152 Capsella rubella
Ca_03895_v3 Cicer arietinum L.
CBR_g29725 Chara braunii
Cc01_g05370 Coffea canephora
CDE08G0294 Ceratophyllum demersum
CDE09G0720 Ceratophyllum demersum
Cfa009858 Carpinus fangiana
Ciclev10016719m.g Citrus clementina
CiPaw.14G112900 Carya illinoinensis
ClCG02G022830 Citrullus lanatus
COL.COLO4_32765 Corchorus olitorius
Cpa.g.sc157.64 Carica papaya
CsaV3_6G038970 Cucumis sativus L.
CSS0022862 Camellia sinensis var. sinensis
DCAR_024408 Daucus carota
Dinv36163 Davidia involucrata
Duzib150G1265 Durio zibethinus
Duzib170G0642 Durio zibethinus
ECA238G2187 Erigeron canadensis
EL10Ac4g10117 Beta vulgaris
EL10Ac4g10139 Beta vulgaris
Eucgr.B03735 Eucalyptus grandis
FAN16G3159 Fragaria x ananassa
FAN21G1525 Fragaria x ananassa
FAN25G3781 Fragaria x ananassa
FvH4_3g27811 Fragaria vesca
Glyma.07G232000 Glycine max
Glyma.20G041000 Glycine max
Gohir.A07G119400 Gossypium hirsutum
Gohir.D07G123600 Gossypium hirsutum
Gorai.001G133600 Gossypium raimondii
GSVIVG01037285001 Vitis vinifera
HanXRQChr14g0427601 Helianthus annuus
Haze_23232 Corylus avellana
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla
HPP92_025149 Vanilla planifolia
HPP92_025151 Vanilla planifolia
Hund07436 Selenicereus undatus
Hund21980 Selenicereus undatus
Lalb_Chr21g0314461 Lupinus albus
Lj1P279T21 Lonicera japonica
Lj6g0025243 Lotus japonicus
Lsat_1_v5_gn_2_3500 Lactuca sativa
Manes.01G178500 Manihot esculenta
Manes.02G139100 Manihot esculenta
Mapoly0002s0074 Marchantia polymorpha
MBI07_g21930_MAGBIO Magnolia biondii
MBI07_g26873_MAGBIO Magnolia biondii
MD03G1165500 Malus domestica
Medtr0180s0050 Medicago truncatula
MELO3C014560.2 Cucumis melo
Migut.D00666 Erythranthe guttata
MSTRG.18462 Avicennia marina
Nitab4.5_0000718g0310 Nicotiana tabacum
Nitab4.5_0003488g0060 Nicotiana tabacum
Nn7g36731 Nelumbo nucifera
Oeu030634.1 Olea europaea
Peaxi162Scf00032g02418 Petunia axillaris
PGR102G2982 Punica granatum
PGSC0003DMG400022716 Solanum tuberosum
Phvul.006G014500 Phaseolus vulgaris
Phvul.009G232900 Phaseolus vulgaris
Potri.001G275300 Populus trichocarpa
Pp3c15_13470 Physcomitrium patens
Pp3c9_17190 Physcomitrium patens
Prupe.4G265500 Prunus persica
Psat0s3115g0040 Pisum sativum
PSO339G1255 Papaver somniferum
PSO384G2311 Papaver somniferum
QL01p017096 Quercus lobata
RcHm_v2.0_Chr5g0050481 Rosa chinensis
Rhsim13G0209200 Rhododendron simsii
Sabra16G0169600 Salix brachista
SalBow6G2930 Salvia bowleyana
Sc06g0004690 Simmondsia chinensis
Sed0010964 Sechium edule
Sed0015967 Sechium edule
SEGI_38632 Sequoiadendron giganteum
SGA_v2.0_scaffold29G12238 Striga asiatica
SHI34292 Sapria himalayana
SMO145G0227 Selaginella moellendorffii
Solyc01g008780.3 Solanum lycopersicum
Sopen01g004290 Solanum pennellii
Sp7g27010 Schrenkiella parvula
TAR633G0745 Trochodendron aralioides
THA.LOC104826454 Tarenaya hassleriana
Thecc.09G248000 Theobroma cacao
Thhalv10026099m.g Eutrema salsugineum
TPR.G16604 Trifolium pratense
TPR.G24411 Trifolium pratense
TWI31G0452 Tripterygium wilfordii
unitig_0.g300 Utricularia gibba
vmacro04034 Vaccinium macrocarpon
VMungo0540G1950 Vigna mungo

User provided reference genes

Program Settings