Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p56990 Brassica napus
Aa31LG5G10440 Aethionema arabicum
Actinidia05093 Actinidia chinensis
Actinidia35349 Actinidia chinensis
Ah.04g165900 Amaranthus hybridus
AL7G25850 Arabidopsis lyrata
Aqoxy4G01855 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea
AT4G26980 Arabidopsis thaliana
ATR0490G005 Amborella trichopoda
ATR0926G001 Amborella trichopoda
Atru.chr2.3418 Acer truncatum
AUR62015782 Chenopodium quinoa
AUR62020435 Chenopodium quinoa
BcaC06g32719 Brassica carinata
BolC7t46005H Brassica oleracea
BraA03t14769Z Brassica rapa
C07p55080 Brassica napus
CAN.G337.136 Capsicum annuum
CANSAT11G0475 Cannabis sativa
CARHR234590 Cardamine hirsuta
Carub.0007s1386 Capsella rubella
Ca_06326_v3 Cicer arietinum L.
CBR_g34195 Chara braunii
Cc05_g13830 Coffea canephora
CDE02G2447 Ceratophyllum demersum
Cfa020337 Carpinus fangiana
Ciclev10008752m.g Citrus clementina
CiPaw.11G190100 Carya illinoinensis
CiPaw.12G130200 Carya illinoinensis
ClCG09G010830 Citrullus lanatus
Cpa.g.sc12.302 Carica papaya
Cre01.g054650 Chlamydomonas reinhardtii
CsaV3_7G021850 Cucumis sativus L.
CSS0043197 Camellia sinensis var. sinensis
DCAR_000788 Daucus carota
DCAR_012722 Daucus carota
Dinv20053 Davidia involucrata
Dinv22258 Davidia involucrata
Duzib268G1400 Durio zibethinus
ECA236G1023 Erigeron canadensis
EL10Ac4g07802 Beta vulgaris
Eucgr.F00758 Eucalyptus grandis
FAN16G2069 Fragaria x ananassa
FAN25G2076 Fragaria x ananassa
FvH4_3g22820 Fragaria vesca
Glyma.02G291800 Glycine max
Glyma.14G022900 Glycine max
Gohir.A01G079900 Gossypium hirsutum
Gohir.D01G067100 Gossypium hirsutum
Gorai.002G089000 Gossypium raimondii
GSVIVG01037656001 Vitis vinifera
HanXRQChr11g0337271 Helianthus annuus
Haze_01866 Corylus avellana
Haze_09681 Corylus avellana
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla
HPP92_013325 Vanilla planifolia
Hund02000 Selenicereus undatus
Lalb_Chr04g0248381 Lupinus albus
Lj8A169G88 Lonicera japonica
LjContig00272g0007634 Lotus japonicus
Lsat_1_v5_gn_7_109981 Lactuca sativa
Manes.03G129700 Manihot esculenta
Mapoly0001s0246 Marchantia polymorpha
MBI18_g14135_MAGBIO Magnolia biondii
MCO05G180 Micromonas commoda
MD11G1217200 Malus domestica
Medtr5g092970 Medicago truncatula
MELO3C013160.2 Cucumis melo
Migut.M01756 Erythranthe guttata
MSTRG.6924 Avicennia marina
Nitab4.5_0003495g0070 Nicotiana tabacum
Nitab4.5_0007360g0010 Nicotiana tabacum
Nn1g03519 Nelumbo nucifera
Os06g0679700 Oryza sativa ssp. japonica
Peaxi162Scf00235g00218 Petunia axillaris
PGR083G2310 Punica granatum
PGSC0003DMG402022316 Solanum tuberosum
Phvul.008G268300 Phaseolus vulgaris
Potri.011G090700 Populus trichocarpa
Pp3c9_17980 Physcomitrium patens
Prupe.4G214500 Prunus persica
Psat2g011720 Pisum sativum
Psat3g185160 Pisum sativum
Psat4g156200 Pisum sativum
Psat5g064560 Pisum sativum
Psat7g029280 Pisum sativum
Psat7g126680 Pisum sativum
PSO063G3629 Papaver somniferum
PSO170G2271 Papaver somniferum
QL08p010009 Quercus lobata
RcHm_v2.0_Chr5g0040061 Rosa chinensis
Rhsim06G0217400 Rhododendron simsii
Sabra11G0086300 Salix brachista
Sc03g0008560 Simmondsia chinensis
Sed0013659 Sechium edule
SGA_v2.0_scaffold165G38275 Striga asiatica
SMO234G0011 Selaginella moellendorffii
Solyc07g064630.4 Solanum lycopersicum
Sopen07g032830 Solanum pennellii
TAR624G1415 Trochodendron aralioides
THA.LOC104809268 Tarenaya hassleriana
Thecc.07G035800 Theobroma cacao
Thhalv10025611m.g Eutrema salsugineum
Thhalv10026846m.g Eutrema salsugineum
TPR.G1211 Trifolium pratense
TWI39G1240 Tripterygium wilfordii
unitig_8.g4621 Utricularia gibba
vmacro11722 Vaccinium macrocarpon
VMungo0647G1675 Vigna mungo
Zm00001eb224560 Zea mays
Zm00001eb273720 Zea mays

User provided reference genes

Program Settings