Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p49290 Brassica napus
Aa31LG10G11220 Aethionema arabicum
Actinidia31619 Actinidia chinensis
Actinidia33875 Actinidia chinensis
Ah.10g026720 Amaranthus hybridus
AL5G37660 Arabidopsis lyrata
Aqoxy4G02381_Aqoxy4G02382 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1M00W9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ST33QA Arachis hypogaea
AT3G56330 Arabidopsis thaliana
ATR1127G148 Amborella trichopoda
Atru.chr12.167 Acer truncatum
AUR62024915 Chenopodium quinoa
AUR62030629 Chenopodium quinoa
BolC8t50786H Brassica oleracea
BraA09t40382Z Brassica rapa
C08p31650 Brassica napus
CAN.G24.7 Capsicum annuum
CARHR166480 Cardamine hirsuta
Carub.0005s2311 Capsella rubella
Ca_16876_v3 Cicer arietinum L.
Cc02_g05470 Coffea canephora
CDE06G0932 Ceratophyllum demersum
Cfa001216 Carpinus fangiana
Cfa001217 Carpinus fangiana
Ciclev10031828m.g Citrus clementina
CiPaw.01G305500 Carya illinoinensis
ClCG07G005040 Citrullus lanatus
COL.COLO4_19445 Corchorus olitorius
Cpa.g.sc19.69 Carica papaya
Cre10.g428100 Chlamydomonas reinhardtii
CsaV3_5G010870 Cucumis sativus L.
CSS0026526 Camellia sinensis var. sinensis
DCAR_014590 Daucus carota
DCAR_014591 Daucus carota
Dinv21837 Davidia involucrata
Duzib114G0477 Durio zibethinus
EL10Ac2g02623 Beta vulgaris
Eucgr.G03129 Eucalyptus grandis
Eucgr.G03130 Eucalyptus grandis
FAN01G1374 Fragaria x ananassa
FAN03G2028 Fragaria x ananassa
FAN06G1082 Fragaria x ananassa
FAN10G0089 Fragaria x ananassa
FAN10G3521 Fragaria x ananassa
FvH4_7g25740 Fragaria vesca
Glyma.06G144200 Glycine max
Gohir.A05G277900 Gossypium hirsutum
Gohir.D05G279500 Gossypium hirsutum
Gohir.D05G279550 Gossypium hirsutum
Gorai.009G293000 Gossypium raimondii
GSVIVG01020332001 Vitis vinifera
GSVIVG01022677001 Vitis vinifera
GSVIVG01027259001 Vitis vinifera
GSVIVG01032697001 Vitis vinifera
GSVIVG01035137001 Vitis vinifera
GSVIVG01035159001 Vitis vinifera
HanXRQChr07g0203671 Helianthus annuus
Haze_17346 Corylus avellana
HPP92_013832 Vanilla planifolia
Hund15829 Selenicereus undatus
Lalb_Chr11g0067871 Lupinus albus
Lj1A965T44 Lonicera japonica
Lj1C965T6 Lonicera japonica
Lj1g0006364 Lotus japonicus
Lj4g0017249 Lotus japonicus
Lsat_1_v5_gn_2_125021 Lactuca sativa
Manes.07G140300 Manihot esculenta
Mapoly0122s0019 Marchantia polymorpha
MBI03_g27103_MAGBIO Magnolia biondii
MCO02G392 Micromonas commoda
MCO10G008 Micromonas commoda
MD01G1164900 Malus domestica
MD01G1165000 Malus domestica
MD07G1232400 Malus domestica
Medtr3g094190 Medicago truncatula
MELO3C020140.2 Cucumis melo
Migut.F00600 Erythranthe guttata
Nitab4.5_0001743g0020 Nicotiana tabacum
Nitab4.5_0004599g0030 Nicotiana tabacum
Nn5g26868 Nelumbo nucifera
Oeu004091.1 Olea europaea
Oeu004092.1 Olea europaea
Os05g0324100 Oryza sativa ssp. japonica
Os05g0324200 Oryza sativa ssp. japonica
Peaxi162Scf00739g00214 Petunia axillaris
PGR142G2558 Punica granatum
PGSC0003DMG401016632 Solanum tuberosum
Phvul.009G142000 Phaseolus vulgaris
Potri.013G093500 Populus trichocarpa
Pp3c22_6520 Physcomitrium patens
PRCOL_00004084 Prasinoderma coloniale
Prupe.2G262600 Prunus persica
Psat5g068000 Pisum sativum
PSO017G4996 Papaver somniferum
QL08p064642 Quercus lobata
RcHm_v2.0_Chr1g0371991 Rosa chinensis
Rhsim03G0151300 Rhododendron simsii
Sabra13G0080500 Salix brachista
Sc14g0005620 Simmondsia chinensis
Sed0019807 Sechium edule
SEGI_12327 Sequoiadendron giganteum
SMO246G0016 Selaginella moellendorffii
Solyc06g049090.3 Solanum lycopersicum
Sopen06g015460 Solanum pennellii
Sp5g06170 Schrenkiella parvula
TAR381G0177 Trochodendron aralioides
TAR381G0881 Trochodendron aralioides
TAR636G3228 Trochodendron aralioides
THA.LOC104824240 Tarenaya hassleriana
Thecc.10G183200 Theobroma cacao
Thhalv10005995m.g Eutrema salsugineum
TPR.G16111 Trifolium pratense
TWI53G0389 Tripterygium wilfordii
unitig_37.g12471 Utricularia gibba
vmacro06881 Vaccinium macrocarpon
VMungo1309G2158 Vigna mungo
Zm00001eb285100 Zea mays

User provided reference genes

Program Settings