Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p24390 Brassica napus
A09p43040 Brassica napus
Aa31LG4G18350 Aethionema arabicum
Actinidia32839 Actinidia chinensis
Ah.02g125420 Amaranthus hybridus
Ah.03g140520 Amaranthus hybridus
AL5G29910 Arabidopsis lyrata
Aqoxy5G00873 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HU6JVE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I5GRN4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RKP7M8 Arachis hypogaea
AT3G49900 Arabidopsis thaliana
ATR1153G068 Amborella trichopoda
ATR1153G077 Amborella trichopoda
Atru.chr3.138 Acer truncatum
Atru.chr4.1892 Acer truncatum
Atru.chr4.1893 Acer truncatum
AUR62004003 Chenopodium quinoa
AUR62040242 Chenopodium quinoa
AUR62040243 Chenopodium quinoa
BcaB01g00654 Brassica carinata
BcaB05g23173 Brassica carinata
BcaC07g39455 Brassica carinata
BcaC09g49982 Brassica carinata
BolC1t02984H Brassica oleracea
BolC8t50111H Brassica oleracea
BraA01t02352Z Brassica rapa
BraA09t39773Z Brassica rapa
C01p30410 Brassica napus
C08p24930 Brassica napus
CAN.G1075.32 Capsicum annuum
CANSAT01G2774 Cannabis sativa
CARHR158980 Cardamine hirsuta
CARHR158990 Cardamine hirsuta
Carub.0005s1626 Capsella rubella
Ca_24696_v3 Cicer arietinum L.
Cc07_g07060 Coffea canephora
CDE02G3485 Ceratophyllum demersum
CDE04G3189 Ceratophyllum demersum
Ciclev10025483m.g Citrus clementina
CiPaw.01G004900 Carya illinoinensis
ClCG01G017570 Citrullus lanatus
COL.COLO4_11571 Corchorus olitorius
Cpa.g.sc6.22 Carica papaya
CsaV3_6G044110 Cucumis sativus L.
CSS0017641 Camellia sinensis var. sinensis
DCAR_025798 Daucus carota
Dinv26926 Davidia involucrata
Duzib147G0604 Durio zibethinus
Duzib264G1056 Durio zibethinus
EL10Ac6g15623 Beta vulgaris
Eucgr.I00707 Eucalyptus grandis
FAN19G0226 Fragaria x ananassa
FAN23G1142 Fragaria x ananassa
FAN23G2863 Fragaria x ananassa
FAN26G1977 Fragaria x ananassa
FAN28G2373 Fragaria x ananassa
FvH4_1g17650 Fragaria vesca
Glyma.01G193900 Glycine max
Glyma.11G048000 Glycine max
Glyma.17G161200 Glycine max
Gohir.A12G076600 Gossypium hirsutum
Gohir.D12G074900 Gossypium hirsutum
Gorai.008G083000 Gossypium raimondii
GSVIVG01000112001 Vitis vinifera
HanXRQChr11g0323131 Helianthus annuus
Haze_15287 Corylus avellana
Hma1.2p1_3538F.1_g336670 Hydrangea macrophylla
Hund13950 Selenicereus undatus
Lalb_Chr16g0378851 Lupinus albus
Lj2g0002010 Lotus japonicus
Lsat_1_v5_gn_4_161681 Lactuca sativa
Manes.13G112000 Manihot esculenta
MD02G1185300 Malus domestica
Medtr5g015540 Medicago truncatula
MELO3C032967.2 Cucumis melo
Migut.L00215 Erythranthe guttata
MSTRG.3472 Avicennia marina
Nitab4.5_0000651g0250 Nicotiana tabacum
Nitab4.5_0008034g0010 Nicotiana tabacum
Nn1g04562 Nelumbo nucifera
Oeu013318.1 Olea europaea
Os07g0587200 Oryza sativa ssp. japonica
Os07g0587250 Oryza sativa ssp. japonica
Peaxi162Scf00548g00661 Petunia axillaris
PGR004G0197 Punica granatum
PGSC0003DMG400021447 Solanum tuberosum
Phvul.002G011000 Phaseolus vulgaris
Phvul.003G235400 Phaseolus vulgaris
Potri.005G149400 Populus trichocarpa
Prupe.6G221500 Prunus persica
Psat2g171440 Pisum sativum
PSO017G0034 Papaver somniferum
PSO170G4592 Papaver somniferum
QL03p006766 Quercus lobata
RcHm_v2.0_Chr2g0107971 Rosa chinensis
Rhsim08G0093800 Rhododendron simsii
SalBow5G0080 Salvia bowleyana
SalBow5G4880 Salvia bowleyana
Sc16g0002920 Simmondsia chinensis
Sed0012414 Sechium edule
SGA_v2.0_scaffold13G06413 Striga asiatica
Solyc02g092420.4 Solanum lycopersicum
Sopen02g036970 Solanum pennellii
Sp5g12210 Schrenkiella parvula
TAR381G0105 Trochodendron aralioides
THA.LOC104821220 Tarenaya hassleriana
Thecc.01G072200 Theobroma cacao
Thhalv10010291m.g Eutrema salsugineum
TPR.G34852 Trifolium pratense
TPR.G40238 Trifolium pratense
TWI73G0815 Tripterygium wilfordii
unitig_32.g10776 Utricularia gibba
unitig_32.g10777 Utricularia gibba
unitig_748.g8387 Utricularia gibba
vmacro18027 Vaccinium macrocarpon
VMungo0251G1929 Vigna mungo
Zm00001eb326040 Zea mays

User provided reference genes

Program Settings