Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G11250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis
Actinidia31423 Actinidia chinensis
Ah.05g172950 Amaranthus hybridus
Ah.05g175170 Amaranthus hybridus
AL1G10390 Arabidopsis lyrata
Aqoxy7G00564 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea
AT1G01930 Arabidopsis thaliana
ATR0757G024 Amborella trichopoda
ATR0757G063 Amborella trichopoda
Atru.chr5.328 Acer truncatum
AUR62004233 Chenopodium quinoa
AUR62013615 Chenopodium quinoa
BolC8t52907H Brassica oleracea
BraA09t42269Z Brassica rapa
C08p53940 Brassica napus
CAN.G170.5 Capsicum annuum
CANSAT56G1004 Cannabis sativa
CARHR000420 Cardamine hirsuta
CARHR000430 Cardamine hirsuta
Carub.0001s0031 Capsella rubella
Ca_07832_v3 Cicer arietinum L.
Cc02_g36520 Coffea canephora
CDE11G0821 Ceratophyllum demersum
Cfa001701 Carpinus fangiana
Cfa022202 Carpinus fangiana
Ciclev10019178m.g Citrus clementina
CiPaw.01G260400 Carya illinoinensis
ClCG05G002100 Citrullus lanatus
COL.COLO4_05508 Corchorus olitorius
COL.COLO4_12575 Corchorus olitorius
Cpa.g.sc18.138 Carica papaya
Cre07.g325715 Chlamydomonas reinhardtii
CsaV3_3G009540 Cucumis sativus L.
CsaV3_4G032230 Cucumis sativus L.
CSS0016394 Camellia sinensis var. sinensis
CSS0048598 Camellia sinensis var. sinensis
Duzib133G0703 Durio zibethinus
ECA236G3401 Erigeron canadensis
ECA240G3107 Erigeron canadensis
EL10Ac1g00937 Beta vulgaris
Eucgr.D02443 Eucalyptus grandis
Eucgr.L02337 Eucalyptus grandis
FAN01G0942 Fragaria x ananassa
FAN03G3111 Fragaria x ananassa
FAN06G2864 Fragaria x ananassa
FAN10G0810 Fragaria x ananassa
FvH4_7g12110 Fragaria vesca
Glyma.09G267800 Glycine max
Glyma.18G222100 Glycine max
Gohir.A08G031700 Gossypium hirsutum
Gohir.D08G042800 Gossypium hirsutum
Gorai.004G041400 Gossypium raimondii
GSVIVG01027532001 Vitis vinifera
HanXRQChr04g0122211 Helianthus annuus
HanXRQChr13g0425441 Helianthus annuus
HanXRQChr13g0425831 Helianthus annuus
Haze_16833 Corylus avellana
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla
HPP92_015074 Vanilla planifolia
Hund27354 Selenicereus undatus
Lalb_Chr01g0021331 Lupinus albus
Lj1g0013249 Lotus japonicus
Lj7A526T89 Lonicera japonica
Lsat_1_v5_gn_3_133341 Lactuca sativa
Lsat_1_v5_gn_7_7481 Lactuca sativa
Manes.01G264800 Manihot esculenta
Mapoly0008s0196 Marchantia polymorpha
MBI04_g46545_MAGBIO Magnolia biondii
MD02G1201200 Malus domestica
Medtr7g075170 Medicago truncatula
Medtr7g075185 Medicago truncatula
Medtr7g075420 Medicago truncatula
Medtr7g075430 Medicago truncatula
Medtr7g075450 Medicago truncatula
MELO3C006175.2 Cucumis melo
Migut.B01651 Erythranthe guttata
Nitab4.5_0004320g0040 Nicotiana tabacum
Nitab4.5_0013912g0010 Nicotiana tabacum
Nn1g01174 Nelumbo nucifera
Oeu003493.1 Olea europaea
Os04g0574600 Oryza sativa ssp. japonica
Peaxi162Scf00021g01312 Petunia axillaris
PGR031G1001 Punica granatum
PGSC0003DMG401012750 Solanum tuberosum
Phvul.008G075100 Phaseolus vulgaris
Potri.002G149800 Populus trichocarpa
Pp3c3_38070 Physcomitrium patens
PRCOL_00005597 Prasinoderma coloniale
Prupe.2G147600 Prunus persica
Psat3g115280 Pisum sativum
PSO478G2587 Papaver somniferum
QL08p051944 Quercus lobata
RcHm_v2.0_Chr1g0350861 Rosa chinensis
Rhsim07G0025500 Rhododendron simsii
Sabra02G0118500 Salix brachista
Sc23g0003500 Simmondsia chinensis
Sed0020963 Sechium edule
SEGI_35234 Sequoiadendron giganteum
SEGI_38546 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28889 Striga asiatica
Solyc01g091510.4 Solanum lycopersicum
Sopen01g037280 Solanum pennellii
Sp1g00370 Schrenkiella parvula
TAR375G1023 Trochodendron aralioides
THA.LOC104817014 Tarenaya hassleriana
Thecc.01G374100 Theobroma cacao
Thhalv10007219m.g Eutrema salsugineum
TPR.G26925 Trifolium pratense
TWI14G1233 Tripterygium wilfordii
unitig_22.g5376 Utricularia gibba
vmacro13383 Vaccinium macrocarpon
VMungo1383G2566 Vigna mungo
Zm00001eb073430 Zea mays

User provided reference genes

Program Settings