Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p01730 Brassica napus
Aa31LG10G2400 Aethionema arabicum
Actinidia01760 Actinidia chinensis
Actinidia15785 Actinidia chinensis
Ah.01g020740 Amaranthus hybridus
AL1G60900 Arabidopsis lyrata
Aqoxy7G03720 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1AXM4T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6PYW3K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6R2JPG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GQ0MHW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UYKR6J Arachis hypogaea
AT1G52620 Arabidopsis thaliana
ATR0322G052 Amborella trichopoda
ATR0598G311 Amborella trichopoda
Atru.chr1.3043 Acer truncatum
Atru.chr4.3032 Acer truncatum
AUR62011538 Chenopodium quinoa
AUR62016357 Chenopodium quinoa
BcaC08g43437 Brassica carinata
BolC6t35888H Brassica oleracea
BraA06t23391Z Brassica rapa
C06p08050 Brassica napus
CAN.G407.98 Capsicum annuum
CARHR042740 Cardamine hirsuta
Carub.0001s4161 Capsella rubella
Ca_01066_v3 Cicer arietinum L.
Ca_20110_v3 Cicer arietinum L.
Cc04_g04190 Coffea canephora
CDE02G2030 Ceratophyllum demersum
Cfa001983 Carpinus fangiana
Cfa001984 Carpinus fangiana
Ciclev10024942m.g Citrus clementina
CiPaw.02G155800 Carya illinoinensis
ClCG07G012740 Citrullus lanatus
COL.COLO4_12924 Corchorus olitorius
Cpa.g.sc10.236 Carica papaya
CsaV3_4G001460 Cucumis sativus L.
CSS0002572 Camellia sinensis var. sinensis
CSS0026240 Camellia sinensis var. sinensis
DCAR_014162 Daucus carota
DCAR_025499 Daucus carota
Dinv30584 Davidia involucrata
Duzib235G1541 Durio zibethinus
ECA232G0226 Erigeron canadensis
EL10Ac9g21918 Beta vulgaris
Eucgr.J03057 Eucalyptus grandis
FAN02G4037 Fragaria x ananassa
FAN05G2141 Fragaria x ananassa
FAN05G3290 Fragaria x ananassa
FAN09G1750 Fragaria x ananassa
FAN09G2760 Fragaria x ananassa
FAN14G2986 Fragaria x ananassa
FvH4_6g30030 Fragaria vesca
Glyma.13G364500 Glycine max
Glyma.15G009300 Glycine max
Gohir.A10G062900 Gossypium hirsutum
Gohir.D10G064600 Gossypium hirsutum
Gorai.011G068600 Gossypium raimondii
GSVIVG01017297001 Vitis vinifera
HanXRQChr09g0274981 Helianthus annuus
Haze_16531 Corylus avellana
Hund00538 Selenicereus undatus
Lalb_Chr22g0350931 Lupinus albus
Lj3g0013909 Lotus japonicus
Lj5C69T16 Lonicera japonica
Lsat_1_v5_gn_4_106101 Lactuca sativa
Manes.11G054300 Manihot esculenta
MD17G1208200 Malus domestica
Medtr2g103520 Medicago truncatula
MELO3C017894.2 Cucumis melo
Migut.D01062 Erythranthe guttata
Nitab4.5_0001764g0060 Nicotiana tabacum
Nitab4.5_0010254g0010 Nicotiana tabacum
Nn8g39431 Nelumbo nucifera
Oeu015243.5 Olea europaea
Oeu026322.1 Olea europaea
Peaxi162Scf00332g00075 Petunia axillaris
PGR031G3623 Punica granatum
PGSC0003DMG400000632 Solanum tuberosum
Phvul.005G176600 Phaseolus vulgaris
Potri.001G139200 Populus trichocarpa
Prupe.3G082900 Prunus persica
Psat0s2501g0040 Pisum sativum
Psat0s2501g0080 Pisum sativum
Psat5g301600 Pisum sativum
PSO210G0638 Papaver somniferum
PSO210G6668 Papaver somniferum
QL05p028543 Quercus lobata
RcHm_v2.0_Chr2g0136061 Rosa chinensis
Rhsim04G0187400 Rhododendron simsii
Rhsim08G0214900 Rhododendron simsii
Sabra01G0108200 Salix brachista
SalBow2G2822 Salvia bowleyana
SalBow2G3112 Salvia bowleyana
SalBow2G3436 Salvia bowleyana
Sc10g0005770 Simmondsia chinensis
Sc25g0002700 Simmondsia chinensis
Sc25g0002710 Simmondsia chinensis
Sc25g0002720 Simmondsia chinensis
Sc25g0002730 Simmondsia chinensis
Sed0026792 Sechium edule
SEGI_26115 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07604 Striga asiatica
SHI20606 Sapria himalayana
Solyc03g116560.1 Solanum lycopersicum
Sopen03g035470 Solanum pennellii
Sp1g39170 Schrenkiella parvula
TAR383G0223 Trochodendron aralioides
TAR623G1671 Trochodendron aralioides
THA.LOC104815536 Tarenaya hassleriana
Thecc.06G069300 Theobroma cacao
Thhalv10011244m.g Eutrema salsugineum
TPR.G37179 Trifolium pratense
TWI18G0691 Tripterygium wilfordii
vmacro19477 Vaccinium macrocarpon
VMungo1080G1389 Vigna mungo
Zm00001eb196310 Zea mays

User provided reference genes

Program Settings