Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p30880 Brassica napus
Aa31LG11G6180 Aethionema arabicum
Aa31LG11G6330 Aethionema arabicum
Actinidia00992 Actinidia chinensis
Ah.16g104230 Amaranthus hybridus
Aqoxy4G02362 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea
AT5G05310 Arabidopsis thaliana
ATR0681G057 Amborella trichopoda
Atru.chr12.157 Acer truncatum
AUR62003430 Chenopodium quinoa
AUR62012358 Chenopodium quinoa
AUR62031486 Chenopodium quinoa
BcaC06g32240 Brassica carinata
BolC9t59902H Brassica oleracea
BraA10t45133Z Brassica rapa
C09p71390 Brassica napus
CAN.G169.4 Capsicum annuum
CANSAT56G1261 Cannabis sativa
CARHR207930 Cardamine hirsuta
Carub.0006s0424 Capsella rubella
Ca_12776_v3 Cicer arietinum L.
Cc02_g05530 Coffea canephora
CDE04G2280 Ceratophyllum demersum
Cfa001223 Carpinus fangiana
Ciclev10031264m.g Citrus clementina
CiPaw.02G198400 Carya illinoinensis
ClCG07G004850 Citrullus lanatus
COL.COLO4_10038 Corchorus olitorius
Cpa.g.sc19.86 Carica papaya
Cre08.g361000 Chlamydomonas reinhardtii
CsaV3_5G010750 Cucumis sativus L.
CSS0030257 Camellia sinensis var. sinensis
DCAR_014588 Daucus carota
ECA232G4264 Erigeron canadensis
EL10Ac2g04256 Beta vulgaris
Eucgr.J00131 Eucalyptus grandis
FAN01G1353 Fragaria x ananassa
FAN03G2834 Fragaria x ananassa
FAN06G1140 Fragaria x ananassa
FAN06G4794 Fragaria x ananassa
FAN10G2384 Fragaria x ananassa
FvH4_7g25670 Fragaria vesca
FvH4_7g25690 Fragaria vesca
Glyma.19G067100 Glycine max
Gohir.A10G180300 Gossypium hirsutum
Gohir.D10G187300 Gossypium hirsutum
Gorai.011G210100 Gossypium raimondii
GSVIVG01032704001 Vitis vinifera
HanXRQChr08g0222561 Helianthus annuus
HanXRQChr15g0493791 Helianthus annuus
Haze_17339 Corylus avellana
HPP92_019064 Vanilla planifolia
Hund15836 Selenicereus undatus
Lalb_Chr22g0360921 Lupinus albus
Lj5g0023407 Lotus japonicus
Lj8A57G58 Lonicera japonica
Lsat_1_v5_gn_9_59361 Lactuca sativa
Manes.10G004900 Manihot esculenta
MBI15_g27349_MAGBIO Magnolia biondii
MD01G1164100 Malus domestica
MD05G1328700 Malus domestica
MD07G1231800 Malus domestica
MD07G1231900 Malus domestica
MD17G1183400 Malus domestica
Medtr1g007630 Medicago truncatula
MELO3C020113.2 Cucumis melo
Migut.F00593 Erythranthe guttata
MSTRG.24128 Avicennia marina
MSTRG.27274 Avicennia marina
Nitab4.5_0000109g0530 Nicotiana tabacum
Nitab4.5_0011715g0010 Nicotiana tabacum
Nn2g10348 Nelumbo nucifera
Oeu020109.1 Olea europaea
Oeu036532.1 Olea europaea
Os11g0112900 Oryza sativa ssp. japonica
Os12g0112300 Oryza sativa ssp. japonica
Peaxi162Scf00739g00017 Petunia axillaris
PGR044G0301 Punica granatum
PGSC0003DMG400024308 Solanum tuberosum
Phvul.001G074700 Phaseolus vulgaris
Potri.019G048700 Populus trichocarpa
Pp3c22_2490 Physcomitrium patens
Prupe.2G261900 Prunus persica
Prupe.2G262300 Prunus persica
Psat6g035880 Pisum sativum
PSO017G6024 Papaver somniferum
PSO170G5674 Papaver somniferum
QL03p030054 Quercus lobata
QL05p063879 Quercus lobata
QL06p040335 Quercus lobata
QL08p064573 Quercus lobata
QL08p064576 Quercus lobata
QL10p038395 Quercus lobata
QL10p065865 Quercus lobata
RcHm_v2.0_Chr1g0371881 Rosa chinensis
RcHm_v2.0_Chr1g0371891 Rosa chinensis
Rhsim09G0184300 Rhododendron simsii
Sc11g0005730 Simmondsia chinensis
Sed0020006 Sechium edule
SEGI_05100 Sequoiadendron giganteum
SEGI_41528 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16643 Striga asiatica
Solyc06g050210.3 Solanum lycopersicum
Sopen06g015650 Solanum pennellii
Sp6g37510 Schrenkiella parvula
TAR623G0065 Trochodendron aralioides
THA.LOC104816518 Tarenaya hassleriana
Thecc.10G176900 Theobroma cacao
Thhalv10013352m.g Eutrema salsugineum
TPR.G24539 Trifolium pratense
TWI09G1614 Tripterygium wilfordii
unitig_46.g18743 Utricularia gibba
vmacro09974 Vaccinium macrocarpon
VMungo0647G0362 Vigna mungo
VMungo0647G0650 Vigna mungo
Zm00001eb406320 Zea mays

User provided reference genes

Program Settings