Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p02650 Brassica napus
Aa31LG1G24180 Aethionema arabicum
Actinidia22067 Actinidia chinensis
AL4G40310 Arabidopsis lyrata
Aqoxy2G00089 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9LMLG Arachis hypogaea
AT2G41950 Arabidopsis thaliana
ATR0598G218 Amborella trichopoda
Atru.chr8.1155 Acer truncatum
AUR62012005 Chenopodium quinoa
AUR62015334 Chenopodium quinoa
BcaC02g12449 Brassica carinata
BcaC03g14280 Brassica carinata
BolC2t07761H Brassica oleracea
BolC4t21956H Brassica oleracea
BraA05t19258Z Brassica rapa
C02p16600 Brassica napus
C04p03160 Brassica napus
CAN.G1314.3 Capsicum annuum
CAN.G274.29 Capsicum annuum
CANSAT64G2825 Cannabis sativa
CARHR137070 Cardamine hirsuta
CARHR137080 Cardamine hirsuta
Carub.0004s2428 Capsella rubella
Ca_08540_v3 Cicer arietinum L.
Cc06_g15510 Coffea canephora
CDE05G2500 Ceratophyllum demersum
CDE11G0339 Ceratophyllum demersum
Cfa020143 Carpinus fangiana
Ciclev10012299m.g Citrus clementina
CiPaw.09G028400 Carya illinoinensis
ClCG10G017680 Citrullus lanatus
COL.COLO4_29358 Corchorus olitorius
Cpa.g.sc9.26 Carica papaya
CsaV3_3G038620 Cucumis sativus L.
CSS0019995 Camellia sinensis var. sinensis
CSS0043811 Camellia sinensis var. sinensis
DCAR_013671 Daucus carota
Dinv24040 Davidia involucrata
Duzib106G1458 Durio zibethinus
ECA248G0678 Erigeron canadensis
EL10Ac3g06884 Beta vulgaris
Eucgr.A02470 Eucalyptus grandis
FAN02G2829 Fragaria x ananassa
FAN09G4209 Fragaria x ananassa
FAN14G3951 Fragaria x ananassa
FvH4_6g21880 Fragaria vesca
Glyma.03G146600 Glycine max
Glyma.19G149900 Glycine max
Gohir.A01G137200 Gossypium hirsutum
Gohir.D01G124800 Gossypium hirsutum
Gorai.002G155400 Gossypium raimondii
GSVIVG01033467001 Vitis vinifera
HanXRQChr01g0024541 Helianthus annuus
Haze_20020 Corylus avellana
Haze_20023 Corylus avellana
HPP92_023458 Vanilla planifolia
HPP92_023474 Vanilla planifolia
Hund19213 Selenicereus undatus
Lalb_Chr15g0079111 Lupinus albus
Lj1g0024455 Lotus japonicus
Lj2C363G3 Lonicera japonica
Lsat_1_v5_gn_1_60941 Lactuca sativa
Manes.08G042600 Manihot esculenta
Mapoly0159s0012 Marchantia polymorpha
MBI19_g17427_MAGBIO Magnolia biondii
MD12G1054600 Malus domestica
MD14G1054000 Malus domestica
Medtr7g093640 Medicago truncatula
MELO3C009608.2 Cucumis melo
Migut.J01868 Erythranthe guttata
MSTRG.6498 Avicennia marina
Nitab4.5_0000009g0210 Nicotiana tabacum
Nitab4.5_0002339g0010 Nicotiana tabacum
Nn2g15741 Nelumbo nucifera
Nn3g21845 Nelumbo nucifera
Nn6g34990 Nelumbo nucifera
Oeu035701.1 Olea europaea
Os03g0226700 Oryza sativa ssp. japonica
Peaxi162Scf00463g00417 Petunia axillaris
PGR004G0977 Punica granatum
PGSC0003DMG400001108 Solanum tuberosum
Phvul.001G144400 Phaseolus vulgaris
Potri.006G194600 Populus trichocarpa
Pp3c12_7730 Physcomitrium patens
Prupe.7G081100 Prunus persica
Psat3g067520 Pisum sativum
PSO541G3114 Papaver somniferum
PSO675G7684 Papaver somniferum
QL07p024496 Quercus lobata
RcHm_v2.0_Chr3g0479231 Rosa chinensis
Rhsim03G0035800 Rhododendron simsii
Sabra06G0149300 Salix brachista
SalBow6G3515 Salvia bowleyana
Sc13g0002390 Simmondsia chinensis
Sed0026757 Sechium edule
SEGI_06955 Sequoiadendron giganteum
SEGI_30907 Sequoiadendron giganteum
SGA_v2.0_scaffold57G20097 Striga asiatica
Solyc03g053020.4 Solanum lycopersicum
Sopen03g011500 Solanum pennellii
Sp4g24220 Schrenkiella parvula
TAR369G0232 Trochodendron aralioides
THA.LOC104824483 Tarenaya hassleriana
Thecc.05G174900 Theobroma cacao
Thhalv10017089m.g Eutrema salsugineum
TPR.G13363 Trifolium pratense
TWI53G1298 Tripterygium wilfordii
unitig_37.g12377 Utricularia gibba
vmacro22625 Vaccinium macrocarpon
VMungo1383G0507 Vigna mungo
Zm00001eb009870 Zea mays

User provided reference genes

Program Settings