Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p40200 Brassica napus
Aa31LG8G4420 Aethionema arabicum
Actinidia18508 Actinidia chinensis
Ah.07g203660 Amaranthus hybridus
AL3G30560 Arabidopsis lyrata
Aqoxy2G02512 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SJ5ARF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TV1R4T Arachis hypogaea
AT3G17470 Arabidopsis thaliana
ATR0796G096 Amborella trichopoda
Atru.chr4.3152 Acer truncatum
AUR62002555 Chenopodium quinoa
AUR62029975 Chenopodium quinoa
BcaB04g18944 Brassica carinata
BcaC01g03759 Brassica carinata
BolC3t17168H Brassica oleracea
BraA03t13173Z Brassica rapa
BraA03t13191Z Brassica rapa
C03p48880 Brassica napus
CAN.G484.92 Capsicum annuum
CANSAT78G1933 Cannabis sativa
CARHR092800 Cardamine hirsuta
Carub.0003s1720 Capsella rubella
Ca_21378_v3 Cicer arietinum L.
Ca_30146_v3 Cicer arietinum L.
CBR_g37166 Chara braunii
Cc01_g04920 Coffea canephora
CDE02G2214 Ceratophyllum demersum
CDE08G1549 Ceratophyllum demersum
Cfa015731 Carpinus fangiana
Ciclev10004629m.g Citrus clementina
CiPaw.01G129100 Carya illinoinensis
ClCG05G006930 Citrullus lanatus
COL.COLO4_34515 Corchorus olitorius
Cpa.g.sc146.22 Carica papaya
Cre03.g208721 Chlamydomonas reinhardtii
CsaV3_3G015600 Cucumis sativus L.
CSS0007810 Camellia sinensis var. sinensis
DCAR_002552 Daucus carota
Dinv18015 Davidia involucrata
Duzib212G0235 Durio zibethinus
ECA233G2595 Erigeron canadensis
EL10Ac3g06253 Beta vulgaris
Eucgr.H04125 Eucalyptus grandis
FAN07G2948 Fragaria x ananassa
FAN12G1784 Fragaria x ananassa
FAN17G1488 Fragaria x ananassa
FAN19G3059 Fragaria x ananassa
FvH4_4g21520 Fragaria vesca
Glyma.13G119600 Glycine max
Glyma.17G040566 Glycine max
Gohir.A10G176700 Gossypium hirsutum
Gohir.D10G183400 Gossypium hirsutum
Gorai.011G205600 Gossypium raimondii
GSVIVG01017689001 Vitis vinifera
HanXRQChr08g0236241 Helianthus annuus
Haze_00765 Corylus avellana
Hma1.2p1_0013F.1_g007900 Hydrangea macrophylla
HPP92_026059 Vanilla planifolia
HPP92_026060 Vanilla planifolia
Lalb_Chr07g0181671 Lupinus albus
Lj3A840T136 Lonicera japonica
Lj4g0002680 Lotus japonicus
Lsat_1_v5_gn_6_69640 Lactuca sativa
Manes.02G178200 Manihot esculenta
Manes.14G158657 Manihot esculenta
Mapoly0002s0095 Marchantia polymorpha
MBI19_g30276_MAGBIO Magnolia biondii
MBI19_g47475_MAGBIO Magnolia biondii
MCO07G002 Micromonas commoda
MD13G1139600 Malus domestica
Medtr4g123930 Medicago truncatula
MELO3C006759.2 Cucumis melo
Migut.L00019 Erythranthe guttata
MSTRG.21741 Avicennia marina
Nitab4.5_0000895g0190 Nicotiana tabacum
Nitab4.5_0003998g0010 Nicotiana tabacum
Nn4g25376 Nelumbo nucifera
Oeu002199.1 Olea europaea
Os05g0161200 Oryza sativa ssp. japonica
Os05g0161500 Oryza sativa ssp. japonica
Os05g0161800 Oryza sativa ssp. japonica
Peaxi162Scf00668g00118 Petunia axillaris
PGR004G1823 Punica granatum
PGSC0003DMG400004684 Solanum tuberosum
Phvul.003G121500 Phaseolus vulgaris
Potri.010G002400 Populus trichocarpa
Pp3c1_30630 Physcomitrium patens
Pp3c2_6630 Physcomitrium patens
PRCOL_00000223 Prasinoderma coloniale
Prupe.1G105100 Prunus persica
Psat0s2012g0240 Pisum sativum
PSO761G0164 Papaver somniferum
QL06p014243 Quercus lobata
RcHm_v2.0_Chr4g0427541 Rosa chinensis
Rhsim04G0248400 Rhododendron simsii
Sabra10G0001900 Salix brachista
SalBow5G2309 Salvia bowleyana
SalBow5G3419 Salvia bowleyana
Sc13g0008060 Simmondsia chinensis
Sc13g0008660 Simmondsia chinensis
Sed0012953 Sechium edule
SEGI_20816 Sequoiadendron giganteum
SGA_v2.0_scaffold47G17643 Striga asiatica
SMO353G0353 Selaginella moellendorffii
Solyc12g098920.2 Solanum lycopersicum
Sopen12g033670 Solanum pennellii
Sp3g15650 Schrenkiella parvula
TAR365G1135 Trochodendron aralioides
THA.LOC104824719 Tarenaya hassleriana
Thecc.04G313200 Theobroma cacao
Thhalv10020367m.g Eutrema salsugineum
TPR.G12536 Trifolium pratense
TWI73G0269 Tripterygium wilfordii
unitig_749.g13347 Utricularia gibba
vmacro08013 Vaccinium macrocarpon
VMungo1215G0142 Vigna mungo
Zm00001eb282440 Zea mays

User provided reference genes

Program Settings