Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p30920 Brassica napus
Aa31LG11G6120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3130 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3242 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3318 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3383 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1269 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5586 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5062 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.397 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.401 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.402 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.437 Anthoceros agrestis
Actinidia13650 Actinidia chinensis
Ah.12g064370 Amaranthus hybridus
AL6G15110 Arabidopsis lyrata
Aqoxy4G02407 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SNS0I7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WYW97W Arachis hypogaea
AT5G05270 Arabidopsis thaliana
ATR1127G203 Amborella trichopoda
Atru.chr12.177 Acer truncatum
BolC9t59906H Brassica oleracea
BraA10t45137Z Brassica rapa
C09p71430 Brassica napus
CAN.G203.51 Capsicum annuum
CANSAT56G2327 Cannabis sativa
CARHR207960 Cardamine hirsuta
Carub.0006s0420 Capsella rubella
Ca_16867_v3 Cicer arietinum L.
Ca_29954_v3 Cicer arietinum L.
Cc02_g05390 Coffea canephora
CDE06G0937 Ceratophyllum demersum
CDE07G0319 Ceratophyllum demersum
CiPaw.02G198800 Carya illinoinensis
ClCG07G005100 Citrullus lanatus
COL.COLO4_08324 Corchorus olitorius
Cpa.g.sc19.60 Carica papaya
CsaV3_5G010920 Cucumis sativus L.
CSS0015529 Camellia sinensis var. sinensis
DCAR_019805 Daucus carota
Dinv34481 Davidia involucrata
Duzib114G0525 Durio zibethinus
Duzib128G2014 Durio zibethinus
ECA233G3418 Erigeron canadensis
EL10Ac2g02642 Beta vulgaris
FAN01G2160 Fragaria x ananassa
FAN03G2408 Fragaria x ananassa
FAN06G1576 Fragaria x ananassa
FAN10G3082 Fragaria x ananassa
FvH4_7g25890 Fragaria vesca
Glyma.04G222400 Glycine max
Glyma.06G143000 Glycine max
Gohir.A05G403200 Gossypium hirsutum
Gohir.D04G012300 Gossypium hirsutum
GSVIVG01032685001 Vitis vinifera
HanXRQChr08g0221541 Helianthus annuus
Haze_17355 Corylus avellana
HPP92_015591 Vanilla planifolia
Hund15819 Selenicereus undatus
Lalb_Chr08g0239161 Lupinus albus
Lalb_Chr23g0272211 Lupinus albus
Lj1g0023491 Lotus japonicus
Lj8A55T83 Lonicera japonica
Lsat_1_v5_gn_6_40681 Lactuca sativa
Lsat_1_v5_gn_6_40701 Lactuca sativa
Lsat_1_v5_gn_8_11480 Lactuca sativa
Manes.07G140900 Manihot esculenta
Mapoly0175s0004 Marchantia polymorpha
MBI03_g08370_MAGBIO Magnolia biondii
MD00G1021400 Malus domestica
MD01G1167300 Malus domestica
MD07G1233400 Malus domestica
MD08G1224200 Malus domestica
Medtr3g093980 Medicago truncatula
MELO3C020146.2 Cucumis melo
MSTRG.172 Avicennia marina
Nitab4.5_0000375g0270 Nicotiana tabacum
Nitab4.5_0002279g0030 Nicotiana tabacum
Nn2g10310 Nelumbo nucifera
Nn5g26853 Nelumbo nucifera
Oeu044164.1 Olea europaea
Os11g0116300 Oryza sativa ssp. japonica
Os12g0115700 Oryza sativa ssp. japonica
PGR142G2065 Punica granatum
Phvul.009G143100 Phaseolus vulgaris
Potri.019G057800 Populus trichocarpa
Pp3c26_4040 Physcomitrium patens
Pp3c4_25770 Physcomitrium patens
Prupe.2G263900 Prunus persica
Psat5g069280 Pisum sativum
PSO017G1798 Papaver somniferum
PSO017G4017 Papaver somniferum
PSO017G4891 Papaver somniferum
PSO017G6829 Papaver somniferum
PSO170G3172 Papaver somniferum
QL08p064804 Quercus lobata
Rhsim03G0152000 Rhododendron simsii
Sabra19G0073500 Salix brachista
SalBow3G3573 Salvia bowleyana
Sc11g0005840 Simmondsia chinensis
Sed0011882 Sechium edule
Sed0020146 Sechium edule
SGA_v2.0_scaffold384G50428 Striga asiatica
SHI28909 Sapria himalayana
SMO358G0139 Selaginella moellendorffii
Solyc05g052240.3 Solanum lycopersicum
Sopen05g030780 Solanum pennellii
Sp6g37560 Schrenkiella parvula
TAR623G0123 Trochodendron aralioides
Thecc.10G181400 Theobroma cacao
Thhalv10014675m.g Eutrema salsugineum
TPR.G16134 Trifolium pratense
TWI53G1993 Tripterygium wilfordii
TWI73G0462 Tripterygium wilfordii
vmacro06890 Vaccinium macrocarpon
VMungo1309G1960 Vigna mungo
Zm00001eb163860 Zea mays

User provided reference genes

Program Settings