Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p01940 Brassica napus
Aa31LG5G2120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.167 Anthoceros agrestis
Actinidia24336 Actinidia chinensis
AL6G50560 Arabidopsis lyrata
Aqoxy5G00723 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.68R93N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IELT58 Arachis hypogaea
AT4G02485 Arabidopsis thaliana
ATR0796G300 Amborella trichopoda
Atru.chr5.1178 Acer truncatum
AUR62008620 Chenopodium quinoa
AUR62033171 Chenopodium quinoa
BcaB01g02036 Brassica carinata
BcaB02g10829 Brassica carinata
BcaNung04058 Brassica carinata
BcaNung04059 Brassica carinata
BolC9t53133H Brassica oleracea
BraA09t35844Z Brassica rapa
C09p02030 Brassica napus
CAN.G339.30 Capsicum annuum
CANSAT25G0048 Cannabis sativa
CANSAT25G1656 Cannabis sativa
CANSAT25G2513 Cannabis sativa
CARHR250790 Cardamine hirsuta
Carub.0006s3464 Capsella rubella
Ca_06294_v3 Cicer arietinum L.
Cc01_g20670 Coffea canephora
Cc01_g20680 Coffea canephora
CDE02G3512 Ceratophyllum demersum
Cfa005945 Carpinus fangiana
Ciclev10021759m.g Citrus clementina
CiPaw.07G106700 Carya illinoinensis
ClCG10G010640 Citrullus lanatus
COL.COLO4_23371 Corchorus olitorius
Cpa.g.sc9.212 Carica papaya
Cre16.g695851 Chlamydomonas reinhardtii
CsaV3_4G000670 Cucumis sativus L.
CSS0020680 Camellia sinensis var. sinensis
DCAR_002818 Daucus carota
Dinv19713 Davidia involucrata
Duzib116G0666 Durio zibethinus
Duzib133G0508 Durio zibethinus
ECA247G0015 Erigeron canadensis
EL10Ac7g17440 Beta vulgaris
Eucgr.H01159 Eucalyptus grandis
FAN15G0699 Fragaria x ananassa
FAN15G1766 Fragaria x ananassa
FAN20G0869 Fragaria x ananassa
FAN24G3039 Fragaria x ananassa
FAN27G1603 Fragaria x ananassa
FvH4_2g25440 Fragaria vesca
Glyma.14G026500 Glycine max
Glyma.14G026566 Glycine max
Gohir.A12G010900 Gossypium hirsutum
Gohir.D12G011300 Gossypium hirsutum
Gorai.008G011300 Gossypium raimondii
GSVIVG01027979001 Vitis vinifera
HanXRQChr15g0465711 Helianthus annuus
Haze_04900 Corylus avellana
Hma1.2p1_0209F.1_g088560 Hydrangea macrophylla
Hma1.2p1_0209F.1_g088570 Hydrangea macrophylla
HPP92_014223 Vanilla planifolia
HPP92_026483 Vanilla planifolia
Hund05413 Selenicereus undatus
Lalb_Chr21g0312551 Lupinus albus
Lj1A1G13 Lonicera japonica
Lj1C32T0 Lonicera japonica
LjContig00310g0013469 Lotus japonicus
Lsat_1_v5_gn_9_1100 Lactuca sativa
Manes.05G063800 Manihot esculenta
Mapoly0003s0075 Marchantia polymorpha
MBI19_g29222_MAGBIO Magnolia biondii
MBI19_g29223_MAGBIO Magnolia biondii
MCO10G232 Micromonas commoda
MD11G1304900 Malus domestica
Medtr5g091920 Medicago truncatula
MELO3C017969.2 Cucumis melo
Migut.D00198 Erythranthe guttata
MSTRG.21623 Avicennia marina
Nitab4.5_0000619g0080 Nicotiana tabacum
Nitab4.5_0003901g0060 Nicotiana tabacum
Nn3g21440 Nelumbo nucifera
Oeu046692.2 Olea europaea
Os11g0657200 Oryza sativa ssp. japonica
Peaxi162Scf00067g02523 Petunia axillaris
PGR119G0665 Punica granatum
PGR119G2452 Punica granatum
PGSC0003DMG400011394 Solanum tuberosum
Phvul.008G264300 Phaseolus vulgaris
Potri.014G131200 Populus trichocarpa
Pp3c19_16790 Physcomitrium patens
PRCOL_00002936 Prasinoderma coloniale
Prupe.8G258600 Prunus persica
Psat2g014480 Pisum sativum
QL12p027175 Quercus lobata
RcHm_v2.0_Chr6g0293671 Rosa chinensis
Rhsim13G0012300 Rhododendron simsii
Sabra14G0097600 Salix brachista
SalBow3G1555 Salvia bowleyana
Sc05g0004190 Simmondsia chinensis
Sed0021826 Sechium edule
SEGI_33486 Sequoiadendron giganteum
SMO364G0875 Selaginella moellendorffii
Solyc09g074920.3 Solanum lycopersicum
Sopen09g029740 Solanum pennellii
Sp6g02400 Schrenkiella parvula
TAR365G0408 Trochodendron aralioides
THA.LOC104801266 Tarenaya hassleriana
Thecc.01G297500 Theobroma cacao
Thhalv10002719m.g Eutrema salsugineum
Thhalv10028943m.g Eutrema salsugineum
TWI59G0641 Tripterygium wilfordii
unitig_0.g1176 Utricularia gibba
unitig_0.g1177 Utricularia gibba
vmacro02466 Vaccinium macrocarpon
VMungo0647G0123 Vigna mungo
Zm00001eb115680 Zea mays

User provided reference genes

Program Settings