Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG6G13240 Aethionema arabicum
Aa31LG6G13250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis
AL6G38800 Arabidopsis lyrata
AL7G14650 Arabidopsis lyrata
Aqoxy5G01548 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea
AT4G36440 Arabidopsis thaliana
ATR1154G040 Amborella trichopoda
Atru.chr3.728 Acer truncatum
AUR62004104 Chenopodium quinoa
AUR62007618 Chenopodium quinoa
BcaNung00732 Brassica carinata
BolC1t00250H Brassica oleracea
BraA01t00229Z Brassica rapa
C01p02610 Brassica napus
CAN.G358.30 Capsicum annuum
CANSAT01G1867 Cannabis sativa
CARHR244770 Cardamine hirsuta
Carub.0007s0387 Capsella rubella
Ca_22341_v3 Cicer arietinum L.
Cc07_g10060 Coffea canephora
CDE06G0805 Ceratophyllum demersum
Cfa006913 Carpinus fangiana
Ciclev10025725m.g Citrus clementina
CiPaw.08G138000 Carya illinoinensis
COL.COLO4_22005 Corchorus olitorius
Cpa.g.sc6.179 Carica papaya
CsaV3_6G046700 Cucumis sativus L.
CSS0042312 Camellia sinensis var. sinensis
DCAR_025973 Daucus carota
Dinv10224 Davidia involucrata
Dinv40030 Davidia involucrata
Duzib147G1209 Durio zibethinus
Duzib264G1030 Durio zibethinus
ECA238G0382 Erigeron canadensis
EL10Ac7g17413 Beta vulgaris
EL10As8g23891 Beta vulgaris
Eucgr.J02381 Eucalyptus grandis
FAN19G2522 Fragaria x ananassa
FAN23G0481 Fragaria x ananassa
FAN26G3258 Fragaria x ananassa
FvH4_1g12510 Fragaria vesca
Glyma.02G052900 Glycine max
Glyma.10G129950 Glycine max
Glyma.16G133100 Glycine max
Gohir.A02G167800 Gossypium hirsutum
Gohir.D03G012200 Gossypium hirsutum
Gorai.003G012500 Gossypium raimondii
GSVIVG01018866001 Vitis vinifera
HanXRQChr09g0256121 Helianthus annuus
HanXRQChr12g0370271 Helianthus annuus
HanXRQChr12g0370281 Helianthus annuus
HanXRQChr14g0441241 Helianthus annuus
HanXRQChr16g0499431 Helianthus annuus
Haze_03843 Corylus avellana
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla
HPP92_008328 Vanilla planifolia
Hund16454 Selenicereus undatus
Lalb_Chr16g0391011 Lupinus albus
Lj2g0002148 Lotus japonicus
Lj4C209T2 Lonicera japonica
Lj4g0018076 Lotus japonicus
Lsat_1_v5_gn_2_78040 Lactuca sativa
Manes.01G140000 Manihot esculenta
Mapoly0033s0048 Marchantia polymorpha
MBI16_g23836_MAGBIO Magnolia biondii
MD02G1139000 Malus domestica
MD02G1139100 Malus domestica
MD15G1252400 Malus domestica
Medtr8g076840 Medicago truncatula
MELO3C007867.2 Cucumis melo
Migut.H02510 Erythranthe guttata
MSTRG.2490 Avicennia marina
Nitab4.5_0000723g0180 Nicotiana tabacum
Nitab4.5_0004708g0010 Nicotiana tabacum
Nn1g05800 Nelumbo nucifera
Os01g0262700 Oryza sativa ssp. japonica
Peaxi162Scf00418g00926 Petunia axillaris
PGR102G0609 Punica granatum
Phvul.003G257300 Phaseolus vulgaris
Potri.007G019400 Populus trichocarpa
Pp3c15_5920 Physcomitrium patens
Pp3c26_9360 Physcomitrium patens
Pp3c9_15730 Physcomitrium patens
Prupe.7G161800 Prunus persica
Psat4g096160 Pisum sativum
PSO731G0058 Papaver somniferum
QL06p035053 Quercus lobata
RcHm_v2.0_Chr2g0100411 Rosa chinensis
RcHm_v2.0_Chr2g0136281 Rosa chinensis
Rhsim08G0122900 Rhododendron simsii
Sabra07G0016600 Salix brachista
SalBow8G5631 Salvia bowleyana
Sc03g0003190 Simmondsia chinensis
Sc03g0003200 Simmondsia chinensis
Sed0012409 Sechium edule
SGA_v2.0_scaffold51G18803 Striga asiatica
SGA_v2.0_scaffold7G03543 Striga asiatica
SMO141G0060 Selaginella moellendorffii
Solyc02g084810.3 Solanum lycopersicum
Sopen02g029480 Solanum pennellii
Sp7g34100 Schrenkiella parvula
TAR381G0553 Trochodendron aralioides
THA.LOC104804245 Tarenaya hassleriana
Thecc.01G027300 Theobroma cacao
Thhalv10000178m.g Eutrema salsugineum
Thhalv10025347m.g Eutrema salsugineum
TPR.G21535 Trifolium pratense
TWI73G0963 Tripterygium wilfordii
unitig_61.g26353 Utricularia gibba
vmacro17722 Vaccinium macrocarpon
VMungo0251G3732 Vigna mungo
Zm00001eb128340 Zea mays

User provided reference genes

Program Settings