Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p00130 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_368.2173 Anthoceros agrestis
Actinidia21140 Actinidia chinensis
Ah.11g050290 Amaranthus hybridus
AL5G46150 Arabidopsis lyrata
Aqoxy2G03446 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BH5QN1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M4INHU Arachis hypogaea
AT3G63290 Arabidopsis thaliana
ATR0665G117 Amborella trichopoda
Atru.chr5.1503 Acer truncatum
AUR62011982 Chenopodium quinoa
AUR62032294 Chenopodium quinoa
BcaB02g08068 Brassica carinata
BcaB02g08069 Brassica carinata
BolC4t24525H Brassica oleracea
BraA04t15733Z Brassica rapa
CAN.G433.12 Capsicum annuum
CANSAT25G2646 Cannabis sativa
CARHR291660 Cardamine hirsuta
Carub.0005s2995 Capsella rubella
CBR_g56394 Chara braunii
Cc01_g19110 Coffea canephora
CDE05G0787 Ceratophyllum demersum
CDE05G1612 Ceratophyllum demersum
Cfa006184 Carpinus fangiana
Ciclev10023787m.g Citrus clementina
CiPaw.07G088100 Carya illinoinensis
ClCG09G007380 Citrullus lanatus
COL.COLO4_09049 Corchorus olitorius
Cpa.g.sc52.110 Carica papaya
CsaV3_7G027850 Cucumis sativus L.
CSS0013542 Camellia sinensis var. sinensis
CSS0022180 Camellia sinensis var. sinensis
DCAR_005859 Daucus carota
Duzib133G0133 Durio zibethinus
ECA236G2804 Erigeron canadensis
EL10Ac5g10508 Beta vulgaris
Eucgr.K03337 Eucalyptus grandis
FAN15G2517 Fragaria x ananassa
FAN15G2655 Fragaria x ananassa
FAN20G1382 Fragaria x ananassa
FAN24G3569 Fragaria x ananassa
FAN27G1711 Fragaria x ananassa
FAN27G1988 Fragaria x ananassa
FAN27G2418 Fragaria x ananassa
FvH4_2g23081 Fragaria vesca
Glyma.02G144900 Glycine max
Glyma.10G029100 Glycine max
Gohir.A12G003100 Gossypium hirsutum
Gohir.D12G002800 Gossypium hirsutum
Gorai.008G002600 Gossypium raimondii
GSVIVG01001200001 Vitis vinifera
GSVIVG01001201001 Vitis vinifera
HanXRQChr04g0115321 Helianthus annuus
Haze_04660 Corylus avellana
Hma1.2p1_1924F.1_g307690 Hydrangea macrophylla
Hma1.2p1_1924F.1_g307700 Hydrangea macrophylla
HPP92_023543 Vanilla planifolia
Hund02858 Selenicereus undatus
Lalb_Chr02g0142571 Lupinus albus
Lj1A51G14 Lonicera japonica
Lj5g0013924 Lotus japonicus
Lsat_1_v5_gn_8_57120 Lactuca sativa
Manes.01G204700 Manihot esculenta
Mapoly0127s0046 Marchantia polymorpha
MBI11_g04239_MAGBIO Magnolia biondii
MBI11_g35085_MAGBIO Magnolia biondii
MBI11_g35086_MAGBIO Magnolia biondii
MBI11_g35087_MAGBIO Magnolia biondii
MD03G1259400 Malus domestica
MD11G1280000 Malus domestica
Medtr1g071470 Medicago truncatula
MELO3C015801.2 Cucumis melo
Migut.D00338 Erythranthe guttata
Nitab4.5_0000252g0180 Nicotiana tabacum
Nitab4.5_0000678g0020 Nicotiana tabacum
Nn6g34147 Nelumbo nucifera
Oeu023625.1 Olea europaea
Os10g0208500 Oryza sativa ssp. japonica
Peaxi162Scf00230g00716 Petunia axillaris
PGR044G0137 Punica granatum
PGR047G0003 Punica granatum
PGSC0003DMG400019349 Solanum tuberosum
Phvul.007G174300 Phaseolus vulgaris
Potri.002G049300 Populus trichocarpa
Pp3c22_5720 Physcomitrium patens
Pp3c22_5780 Physcomitrium patens
Prupe.8G235900 Prunus persica
Psat6g059280 Pisum sativum
PSO170G3117 Papaver somniferum
QL12p020415 Quercus lobata
RcHm_v2.0_Chr6g0290231 Rosa chinensis
Rhsim01G0272400 Rhododendron simsii
Sabra02G0040100 Salix brachista
Sabra05G0163300 Salix brachista
SalBow4G0867 Salvia bowleyana
SalBow4G3164 Salvia bowleyana
Sc05g0001260 Simmondsia chinensis
Sed0009701 Sechium edule
SEGI_00902 Sequoiadendron giganteum
SEGI_14182 Sequoiadendron giganteum
SEGI_17080 Sequoiadendron giganteum
SEGI_40565 Sequoiadendron giganteum
SGA_v2.0_scaffold138G35303 Striga asiatica
SMO358G0716 Selaginella moellendorffii
Solyc09g065580.4 Solanum lycopersicum
Sopen09g027330 Solanum pennellii
Sp5g00240 Schrenkiella parvula
THA.LOC104801985 Tarenaya hassleriana
Thecc.01G272900 Theobroma cacao
Thhalv10006021m.g Eutrema salsugineum
TPR.G25699 Trifolium pratense
TWI75G0310 Tripterygium wilfordii
unitig_8.g3726 Utricularia gibba
vmacro14901 Vaccinium macrocarpon
VMungo0720G2797 Vigna mungo
Zm00001eb202090 Zea mays

User provided reference genes

Program Settings