Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p33890 Brassica napus
Aa31LG8G2760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2587 Anthoceros agrestis
Ah.06g183750 Amaranthus hybridus
AL3G28100 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.6T6X8W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F90IWS Arachis hypogaea
AT3G15520 Arabidopsis thaliana
ATR0693G395 Amborella trichopoda
Atru.chr2.2775 Acer truncatum
Atru.chr2.2794 Acer truncatum
Atru.chr2.2798 Acer truncatum
Atru.chr2.2807 Acer truncatum
Atru.chr2.2809 Acer truncatum
AUR62015625 Chenopodium quinoa
AUR62029335 Chenopodium quinoa
BcaB06g29587 Brassica carinata
BcaC05g28965 Brassica carinata
BolC5t33848H Brassica oleracea
BraA05t22211Z Brassica rapa
C05p51600 Brassica napus
CAN.G433.18 Capsicum annuum
CANSAT11G1341 Cannabis sativa
CARHR090580 Cardamine hirsuta
Carub.0003s1525 Capsella rubella
Ca_23043_v3 Cicer arietinum L.
CBR_g19822 Chara braunii
Cc05_g12540 Coffea canephora
CDE02G3099 Ceratophyllum demersum
Cfa020530 Carpinus fangiana
Ciclev10008058m.g Citrus clementina
Ciclev10008220m.g Citrus clementina
CiPaw.12G122000 Carya illinoinensis
ClCG10G006680 Citrullus lanatus
COL.COLO4_03558 Corchorus olitorius
Cpa.g.sc80.97 Carica papaya
Cre06.g303300 Chlamydomonas reinhardtii
CsaV3_3G006070 Cucumis sativus L.
CSS0014964 Camellia sinensis var. sinensis
CSS0042082 Camellia sinensis var. sinensis
DCAR_013080 Daucus carota
Dinv22373 Davidia involucrata
Duzib268G1025 Durio zibethinus
ECA240G3736 Erigeron canadensis
EL10Ac4g08093 Beta vulgaris
Eucgr.F01089 Eucalyptus grandis
FAN11G0427 Fragaria x ananassa
FAN16G0832 Fragaria x ananassa
FAN25G0840 Fragaria x ananassa
FvH4_3g20740 Fragaria vesca
Glyma.06G249300 Glycine max
Glyma.12G148600 Glycine max
Gohir.A11G282747 Gossypium hirsutum
Gohir.D11G296300 Gossypium hirsutum
Gorai.007G319400 Gossypium raimondii
GSVIVG01014408001 Vitis vinifera
HanXRQChr10g0289501 Helianthus annuus
Haze_09503 Corylus avellana
Hma1.2p1_1274F.1_g271940 Hydrangea macrophylla
Hma1.2p1_2417F.1_g321750 Hydrangea macrophylla
Hma1.2p1_2417F.1_g321760 Hydrangea macrophylla
HPP92_001820 Vanilla planifolia
Hund10341 Selenicereus undatus
Hund15928 Selenicereus undatus
Lalb_Chr19g0134361 Lupinus albus
Lj1A850T65 Lonicera japonica
Lj3g0016801 Lotus japonicus
Lsat_1_v5_gn_9_95880 Lactuca sativa
Manes.03G114600 Manihot esculenta
Mapoly0082s0064 Marchantia polymorpha
MCO05G047 Micromonas commoda
MD03G1222300 Malus domestica
Medtr8g059435 Medicago truncatula
MELO3C016542.2 Cucumis melo
Migut.H01913 Erythranthe guttata
MSTRG.14374 Avicennia marina
Nitab4.5_0000662g0050 Nicotiana tabacum
Nitab4.5_0001610g0020 Nicotiana tabacum
Nn1g03972 Nelumbo nucifera
Oeu055670.1 Olea europaea
Os07g0565600 Oryza sativa ssp. japonica
Peaxi162Scf00000g00497 Petunia axillaris
PGR083G0724 Punica granatum
PGSC0003DMG400008569 Solanum tuberosum
Phvul.011G148100 Phaseolus vulgaris
Potri.001G404700 Populus trichocarpa
Pp3c13_22210 Physcomitrium patens
Pp3c3_20400 Physcomitrium patens
Prupe.4G187400 Prunus persica
Psat7g032000 Pisum sativum
PSO541G1958 Papaver somniferum
PSO675G5315 Papaver somniferum
QL08p019137 Quercus lobata
RcHm_v2.0_Chr5g0033671 Rosa chinensis
RcHm_v2.0_Chr5g0034911 Rosa chinensis
RcHm_v2.0_Chr5g0034961 Rosa chinensis
Rhsim06G0193900 Rhododendron simsii
Rhsim06G0194400 Rhododendron simsii
Sabra16G0266000 Salix brachista
SalBow7G3299 Salvia bowleyana
Sc16g0006830 Simmondsia chinensis
Sed0026398 Sechium edule
SEGI_03689 Sequoiadendron giganteum
SGA_v2.0_scaffold9G04949 Striga asiatica
SMO367G0771 Selaginella moellendorffii
Solyc12g013580.3 Solanum lycopersicum
Sopen12g006940 Solanum pennellii
Sp3g13780 Schrenkiella parvula
TAR674G0003 Trochodendron aralioides
THA.LOC104818055 Tarenaya hassleriana
Thecc.07G074700 Theobroma cacao
Thhalv10020685m.g Eutrema salsugineum
TPR.G29364 Trifolium pratense
TWI39G0599 Tripterygium wilfordii
unitig_899.g15558 Utricularia gibba
vmacro11823 Vaccinium macrocarpon
VMungo1127G1600 Vigna mungo
Zm00001eb107080 Zea mays

User provided reference genes

Program Settings