Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p08990 Brassica napus
A07p07240 Brassica napus
Aa31LG9G5010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis
Actinidia23709 Actinidia chinensis
Ah.12g052960 Amaranthus hybridus
AL3G40810 Arabidopsis lyrata
Aqoxy5G00028 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea
AT3G25120 Arabidopsis thaliana
ATR0561G177 Amborella trichopoda
Atru.chr6.1426 Acer truncatum
AUR62007023 Chenopodium quinoa
AUR62019885 Chenopodium quinoa
BcaB03g16157 Brassica carinata
BcaB06g26722 Brassica carinata
BcaC02g09450 Brassica carinata
BcaC06g35782 Brassica carinata
BolC4t25853H Brassica oleracea
BolC7t41559H Brassica oleracea
BraA04t16594Z Brassica rapa
BraA07t28510Z Brassica rapa
C04p42860 Brassica napus
C07p10930 Brassica napus
CAN.G181.54 Capsicum annuum
CANSAT01G3095 Cannabis sativa
CARHR101440 Cardamine hirsuta
CARHR218390 Cardamine hirsuta
Carub.0003s2545 Capsella rubella
Ca_19566_v3 Cicer arietinum L.
Ca_23225_v3 Cicer arietinum L.
CBR_g52029 Chara braunii
Cc01_g16700 Coffea canephora
CDE05G2155 Ceratophyllum demersum
Cfa004160 Carpinus fangiana
Ciclev10022385m.g Citrus clementina
CiPaw.02G023800 Carya illinoinensis
ClCG09G008610 Citrullus lanatus
COL.COLO4_15616 Corchorus olitorius
COL.COLO4_35607 Corchorus olitorius
Cpa.g.sc21.107 Carica papaya
CsaV3_7G026360 Cucumis sativus L.
CSS0002557 Camellia sinensis var. sinensis
DCAR_012670 Daucus carota
Dinv12648 Davidia involucrata
Dinv19171 Davidia involucrata
Duzib138G1661 Durio zibethinus
ECA236G1739 Erigeron canadensis
EL10Ac5g12475 Beta vulgaris
Eucgr.K02137 Eucalyptus grandis
FAN27G1455 Fragaria x ananassa
FvH4_2g18530 Fragaria vesca
Glyma.17G151300 Glycine max
Gohir.A07G093200 Gossypium hirsutum
Gohir.D07G097800 Gossypium hirsutum
Gorai.001G105200 Gossypium raimondii
GSVIVG01003251001 Vitis vinifera
HanXRQChr16g0500591 Helianthus annuus
Haze_15251 Corylus avellana
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla
HPP92_021467 Vanilla planifolia
Hund05578 Selenicereus undatus
Lalb_Chr12g0209871 Lupinus albus
Lj1C89G17 Lonicera japonica
Lj3g0009647 Lotus japonicus
Lsat_1_v5_gn_8_89340 Lactuca sativa
Manes.13G049500 Manihot esculenta
Mapoly0010s0131 Marchantia polymorpha
MBI11_g07417_MAGBIO Magnolia biondii
MCO07G654 Micromonas commoda
MD05G1171500 Malus domestica
MD10G1159700 Malus domestica
Medtr8g012725 Medicago truncatula
MELO3C021082.2 Cucumis melo
Migut.N00632 Erythranthe guttata
MSTRG.17994 Avicennia marina
Nitab4.5_0000045g0540 Nicotiana tabacum
Nitab4.5_0002616g0150 Nicotiana tabacum
Nitab4.5_0002641g0110 Nicotiana tabacum
Os04g0376100 Oryza sativa ssp. japonica
Peaxi162Scf00068g02310 Petunia axillaris
Peaxi162Scf00372g01214 Petunia axillaris
PGR044G2699 Punica granatum
PGSC0003DMG400022033 Solanum tuberosum
Phvul.010G021800 Phaseolus vulgaris
Potri.002G246000 Populus trichocarpa
Pp3c22_13870 Physcomitrium patens
Prupe.8G198800 Prunus persica
Psat4g203520 Pisum sativum
PSO063G5306 Papaver somniferum
QL09p051225 Quercus lobata
RcHm_v2.0_Chr6g0284091 Rosa chinensis
Rhsim01G0253100 Rhododendron simsii
Rhsim01G0253200 Rhododendron simsii
Sabra02G0187300 Salix brachista
SalBow3G4070 Salvia bowleyana
Sc17g0002120 Simmondsia chinensis
Sc17g0002130 Simmondsia chinensis
Sed0008494 Sechium edule
SEGI_12663 Sequoiadendron giganteum
SGA_v2.0_scaffold6G03220 Striga asiatica
SMO337G0092 Selaginella moellendorffii
Solyc06g007800.4 Solanum lycopersicum
Sopen06g002680 Solanum pennellii
Sp3g22710 Schrenkiella parvula
TAR362G0955 Trochodendron aralioides
THA.LOC104804623 Tarenaya hassleriana
Thecc.01G219900 Theobroma cacao
Thhalv10002682m.g Eutrema salsugineum
Thhalv10026882m.g Eutrema salsugineum
TPR.G11194 Trifolium pratense
TWI18G0944 Tripterygium wilfordii
unitig_0.g374 Utricularia gibba
vmacro14734 Vaccinium macrocarpon
VMungo0331G1591 Vigna mungo
Zm00001eb086040 Zea mays

User provided reference genes

Program Settings