Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p29960 Brassica napus
Aa31LG5G9340 Aethionema arabicum
Actinidia15267 Actinidia chinensis
Ah.07g209080 Amaranthus hybridus
AL6G16520 Arabidopsis lyrata
AL6G16990 Arabidopsis lyrata
Aqoxy5G01393 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea
AT5G06430 Arabidopsis thaliana
ATR0225G026 Amborella trichopoda
Atru.chr13.615 Acer truncatum
AUR62016018 Chenopodium quinoa
AUR62021223 Chenopodium quinoa
BcaC06g32375 Brassica carinata
BcaC06g32576 Brassica carinata
BolC9t59782H Brassica oleracea
BraA10t45035Z Brassica rapa
C09p70370 Brassica napus
CAN.G1110.13 Capsicum annuum
CANSAT56G4245 Cannabis sativa
CARHR206180 Cardamine hirsuta
CARHR285910 Cardamine hirsuta
Carub.0006s0531 Capsella rubella
Carub.0006s0578 Capsella rubella
CBR_g61518 Chara braunii
Cc10_g03850 Coffea canephora
CDE04G1657 Ceratophyllum demersum
CDE07G1453 Ceratophyllum demersum
Cfa018502 Carpinus fangiana
Ciclev10002498m.g Citrus clementina
CiPaw.15G064100 Carya illinoinensis
ClCG08G015590 Citrullus lanatus
COL.COLO4_26447 Corchorus olitorius
Cpa.g.sc376.3 Carica papaya
Cre14.g615250 Chlamydomonas reinhardtii
CsaV3_2G028180 Cucumis sativus L.
CSS0036679 Camellia sinensis var. sinensis
CSS0036769 Camellia sinensis var. sinensis
DCAR_008785 Daucus carota
Dinv35992 Davidia involucrata
Duzib041G0477 Durio zibethinus
Duzib093G1402 Durio zibethinus
ECA232G0465 Erigeron canadensis
EL10Ac3g05711 Beta vulgaris
Eucgr.E03397 Eucalyptus grandis
Eucgr.L00645 Eucalyptus grandis
FAN15G1697 Fragaria x ananassa
FAN27G1218 Fragaria x ananassa
FvH4_2g40760 Fragaria vesca
Glyma.09G029200 Glycine max
Glyma.20G204600 Glycine max
Gohir.A06G015700 Gossypium hirsutum
Gohir.D06G013900 Gossypium hirsutum
Gorai.010G016600 Gossypium raimondii
GSVIVG01009569001 Vitis vinifera
HanXRQChr09g0268121 Helianthus annuus
Haze_17574 Corylus avellana
HPP92_009608 Vanilla planifolia
Hund23634 Selenicereus undatus
Lalb_Chr06g0172721 Lupinus albus
Lj4A777T61 Lonicera japonica
Lj5g0003340 Lotus japonicus
Lsat_1_v5_gn_4_124401 Lactuca sativa
Manes.10G083100 Manihot esculenta
Mapoly0072s0021 Marchantia polymorpha
MD08G1060400 Malus domestica
MD15G1036100 Malus domestica
Medtr1g075100 Medicago truncatula
MELO3C010894.2 Cucumis melo
Migut.C00611 Erythranthe guttata
MSTRG.1327 Avicennia marina
Nitab4.5_0000074g0180 Nicotiana tabacum
Nitab4.5_0009129g0010 Nicotiana tabacum
Nn5g30170 Nelumbo nucifera
Oeu040900.1 Olea europaea
Os11g0592900 Oryza sativa ssp. japonica
Os11g0597500 Oryza sativa ssp. japonica
Os11g0597601 Oryza sativa ssp. japonica
Peaxi162Scf00324g00610 Petunia axillaris
PGR031G1503 Punica granatum
PGR031G1590 Punica granatum
PGSC0003DMG400014433 Solanum tuberosum
Phvul.004G112200 Phaseolus vulgaris
Phvul.008G161700 Phaseolus vulgaris
Phvul.L001959 Phaseolus vulgaris
Potri.014G035300 Populus trichocarpa
Pp3c14_7090 Physcomitrium patens
Prupe.1G390300 Prunus persica
Psat6g128400 Pisum sativum
PSO170G4587 Papaver somniferum
QL02p006151 Quercus lobata
QL03p014147 Quercus lobata
RcHm_v2.0_Chr6g0299831 Rosa chinensis
Rhsim06G0045800 Rhododendron simsii
Sabra14G0025200 Salix brachista
SalBow1G1949 Salvia bowleyana
SalBow6G5080 Salvia bowleyana
Sc02g0006830 Simmondsia chinensis
Sed0017537 Sechium edule
SGA_v2.0_scaffold127G34009 Striga asiatica
SGA_v2.0_scaffold217G42431 Striga asiatica
SMO184G0001 Selaginella moellendorffii
Solyc10g006520.3 Solanum lycopersicum
Sopen10g002470 Solanum pennellii
Sp6g36430 Schrenkiella parvula
TAR381G0050 Trochodendron aralioides
TAR625G1025 Trochodendron aralioides
THA.LOC104803789 Tarenaya hassleriana
Thecc.08G014600 Theobroma cacao
Thhalv10014748m.g Eutrema salsugineum
TPR.G28895 Trifolium pratense
TWI36G0635 Tripterygium wilfordii
unitig_19.g30007 Utricularia gibba
unitig_8.g5015 Utricularia gibba
vmacro21565 Vaccinium macrocarpon
VMungo0720G1195 Vigna mungo
Zm00001eb167650 Zea mays

User provided reference genes

Program Settings