Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00310 Brassica napus
A06p48570 Brassica napus
Aa31LG6G15960 Aethionema arabicum
Aa31LG7G14800 Aethionema arabicum
Actinidia08228 Actinidia chinensis
Actinidia27896 Actinidia chinensis
Ah.01g006260 Amaranthus hybridus
AL7G11290 Arabidopsis lyrata
Aqoxy5G01642 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0D280N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PI6USP Arachis hypogaea
AT4G39300 Arabidopsis thaliana
ATR0733G142 Amborella trichopoda
Atru.chr5.3014 Acer truncatum
AUR62011324 Chenopodium quinoa
AUR62016736 Chenopodium quinoa
BcaNung01271 Brassica carinata
BcaNung02343 Brassica carinata
BcaNung03879 Brassica carinata
BolC1t00048H Brassica oleracea
BolC7t46735H Brassica oleracea
BraA01t00038Z Brassica rapa
C01p00430 Brassica napus
C07p63250 Brassica napus
CARHR247400 Cardamine hirsuta
Carub.0007s0121 Capsella rubella
Ca_20875_v3 Cicer arietinum L.
Cc02_g17570 Coffea canephora
CDE04G2003 Ceratophyllum demersum
Cfa005004 Carpinus fangiana
Ciclev10029674m.g Citrus clementina
CiPaw.05G064400 Carya illinoinensis
ClCG02G005020 Citrullus lanatus
COL.COLO4_25930 Corchorus olitorius
Cpa.g.sc62.150 Carica papaya
CsaV3_7G023550 Cucumis sativus L.
CSS0001017 Camellia sinensis var. sinensis
CSS0023455 Camellia sinensis var. sinensis
DCAR_003674 Daucus carota
Dinv42065 Davidia involucrata
Duzib052G0491 Durio zibethinus
Duzib248G0712 Durio zibethinus
ECA234G2659 Erigeron canadensis
EL10Ac9g21725 Beta vulgaris
Eucgr.I01270 Eucalyptus grandis
FAN15G0619 Fragaria x ananassa
FAN16G3600 Fragaria x ananassa
FAN24G2015 Fragaria x ananassa
FAN27G0567 Fragaria x ananassa
FvH4_2g08780 Fragaria vesca
Glyma.11G117900 Glycine max
Glyma.12G043301 Glycine max
Gohir.A03G194400 Gossypium hirsutum
Gohir.A12G028700 Gossypium hirsutum
Gohir.D02G215600 Gossypium hirsutum
Gohir.D12G028200 Gossypium hirsutum
Gorai.005G243600 Gossypium raimondii
Gorai.008G028800 Gossypium raimondii
GSVIVG01031965001 Vitis vinifera
HanXRQChr10g0307051 Helianthus annuus
Hma1.2p1_0066F.1_g036420 Hydrangea macrophylla
Hma1.2p1_0633F.1_g192560 Hydrangea macrophylla
HPP92_017358 Vanilla planifolia
Hund06233 Selenicereus undatus
Lalb_Chr01g0002551 Lupinus albus
Lalb_Chr03g0025701 Lupinus albus
Lj3g0004404 Lotus japonicus
Lj5g0021871 Lotus japonicus
Lsat_1_v5_gn_5_118560 Lactuca sativa
Lsat_1_v5_gn_7_89221 Lactuca sativa
Lsat_1_v5_gn_9_70521 Lactuca sativa
Manes.17G101000 Manihot esculenta
MD05G1030300 Malus domestica
MD10G1031700 Malus domestica
MD10G1076400 Malus domestica
Medtr4g070030 Medicago truncatula
MELO3C012523.2 Cucumis melo
Migut.B00236 Erythranthe guttata
Nn1g04840 Nelumbo nucifera
Nn5g30294 Nelumbo nucifera
Os01g0551400 Oryza sativa ssp. japonica
PGR142G1230 Punica granatum
Phvul.011G045300 Phaseolus vulgaris
Potri.004G154800 Populus trichocarpa
Potri.009G115900 Populus trichocarpa
Prupe.8G097200 Prunus persica
Psat7g184720 Pisum sativum
PSO144G0109 Papaver somniferum
PSO144G0117 Papaver somniferum
PSO541G0900 Papaver somniferum
PSO675G5014 Papaver somniferum
PSO675G5258 Papaver somniferum
QL05p011176 Quercus lobata
QL12p018934 Quercus lobata
RcHm_v2.0_Chr1g0349571 Rosa chinensis
RcHm_v2.0_Chr5g0010131 Rosa chinensis
RcHm_v2.0_Chr6g0264231 Rosa chinensis
Rhsim11G0177000 Rhododendron simsii
Sabra04G0102700 Salix brachista
Sabra09G0089100 Salix brachista
SalBow6G1480 Salvia bowleyana
SalBow6G2329 Salvia bowleyana
Sc18g0004470 Simmondsia chinensis
Sed0007595 Sechium edule
Sed0021705 Sechium edule
Sp7g36570 Schrenkiella parvula
TAR381G1290 Trochodendron aralioides
TAR625G1191 Trochodendron aralioides
THA.LOC104824828 Tarenaya hassleriana
Thecc.02G085300 Theobroma cacao
Thhalv10026662m.g Eutrema salsugineum
TPR.G19399 Trifolium pratense
TWI31G1395 Tripterygium wilfordii
unitig_744.g24249 Utricularia gibba
vmacro02108 Vaccinium macrocarpon
VMungo1127G0063 Vigna mungo
Zm00001eb066650 Zea mays
Zm00001eb433440 Zea mays
Zm00001eb433450 Zea mays

User provided reference genes

Program Settings