Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p31340 Brassica napus
A06p45070 Brassica napus
Aa31csc22G110 Aethionema arabicum
Actinidia27471 Actinidia chinensis
AL7G37400 Arabidopsis lyrata
AL8G10530 Arabidopsis lyrata
Aqoxy7G00783 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8JK4ZI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A5XQNM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D6ADVN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QP3VPD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YI4YN9 Arachis hypogaea
AT4G17310 Arabidopsis thaliana
AT5G47455 Arabidopsis thaliana
ATR0317G117 Amborella trichopoda
AUR62007089 Chenopodium quinoa
AUR62019952 Chenopodium quinoa
BcaC03g16962 Brassica carinata
BcaC06g31382 Brassica carinata
BcaC06g31384 Brassica carinata
BcaC06g34251 Brassica carinata
BolC2t10960H Brassica oleracea
BolC7t43652H Brassica oleracea
BraA02t08136Z Brassica rapa
BraA06t27376Z Brassica rapa
C02p48680 Brassica napus
C07p31100 Brassica napus
CAN.G1058.38 Capsicum annuum
CANSAT21G1567 Cannabis sativa
CARHR173910 Cardamine hirsuta
Carub.0007s2409 Capsella rubella
Carub.0008s0032 Capsella rubella
Ca_21971_v3 Cicer arietinum L.
Ca_23117_v3 Cicer arietinum L.
Cc08_g12340 Coffea canephora
CDE12G0636 Ceratophyllum demersum
Ciclev10023003m.g Citrus clementina
CiPaw.11G079800 Carya illinoinensis
CiPaw.12G051800 Carya illinoinensis
ClCG10G002600 Citrullus lanatus
COL.COLO4_37166 Corchorus olitorius
Cpa.g.sc29.168 Carica papaya
CsaV3_3G002630 Cucumis sativus L.
CSS0021998 Camellia sinensis var. sinensis
Dinv44108 Davidia involucrata
Duzib084G1100 Durio zibethinus
Duzib205G1027 Durio zibethinus
ECA240G1429 Erigeron canadensis
FAN04G0434 Fragaria x ananassa
FAN08G1018 Fragaria x ananassa
FAN18G2762 Fragaria x ananassa
FvH4_5g19060 Fragaria vesca
Glyma.03G118000 Glycine max
Glyma.05G060100 Glycine max
Glyma.17G142500 Glycine max
Glyma.17G210100 Glycine max
Glyma.18G109000 Glycine max
Gohir.A08G169800 Gossypium hirsutum
Gohir.D08G188100 Gossypium hirsutum
Gorai.004G198000 Gossypium raimondii
GSVIVG01004713001 Vitis vinifera
GSVIVG01006992001 Vitis vinifera
HanXRQChr03g0087771 Helianthus annuus
HPP92_014491 Vanilla planifolia
HPP92_025465 Vanilla planifolia
Hund14549 Selenicereus undatus
Lalb_Chr09g0330061 Lupinus albus
Lalb_Chr16g0379561 Lupinus albus
Lalb_Chr16g0386731 Lupinus albus
Lj3g0016504 Lotus japonicus
Lj4g0004620 Lotus japonicus
Lj8A263T41 Lonicera japonica
Lsat_1_v5_gn_6_90840 Lactuca sativa
Manes.01G081200 Manihot esculenta
Manes.02G040300 Manihot esculenta
MD04G1063100 Malus domestica
Medtr4g100820 Medicago truncatula
Medtr8g005860 Medicago truncatula
MELO3C013933.2 Cucumis melo
Migut.A01106 Erythranthe guttata
MSTRG.12104 Avicennia marina
Nitab4.5_0000882g0040 Nicotiana tabacum
Nitab4.5_0001501g0020 Nicotiana tabacum
Nn6g33933 Nelumbo nucifera
Oeu020431.1 Olea europaea
Os02g0658300 Oryza sativa ssp. japonica
PGR031G2035 Punica granatum
PGSC0003DMG400004817 Solanum tuberosum
Phvul.003G221200 Phaseolus vulgaris
Phvul.010G056600 Phaseolus vulgaris
Potri.001G333800 Populus trichocarpa
Potri.017G068600 Populus trichocarpa
Prupe.5G068300 Prunus persica
Psat4g072480 Pisum sativum
QL04p035820 Quercus lobata
QL12p012005 Quercus lobata
RcHm_v2.0_Chr7g0203511 Rosa chinensis
Rhsim07G0109700 Rhododendron simsii
Sabra16G0215100 Salix brachista
SalBow4G0096 Salvia bowleyana
SalBow4G2872 Salvia bowleyana
SalBow6G0204 Salvia bowleyana
SalBow6G1716 Salvia bowleyana
Sed0021009 Sechium edule
SEGI_23663 Sequoiadendron giganteum
SEGI_29263 Sequoiadendron giganteum
Solyc08g078560.3 Solanum lycopersicum
Sopen08g027040 Solanum pennellii
Sp2g12170 Schrenkiella parvula
TAR629G0824 Trochodendron aralioides
THA.LOC104812806 Tarenaya hassleriana
Thecc.03G250100 Theobroma cacao
Thhalv10001082m.g Eutrema salsugineum
TPR.G28732 Trifolium pratense
TPR.G37627 Trifolium pratense
TWI60G1284 Tripterygium wilfordii
TWI81G0572 Tripterygium wilfordii
unitig_21.g20319 Utricularia gibba
vmacro21548 Vaccinium macrocarpon

User provided reference genes

Program Settings