Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p19650 Brassica napus
A07p40640 Brassica napus
Aa31LG4G5230 Aethionema arabicum
Actinidia12418 Actinidia chinensis
Actinidia37474 Actinidia chinensis
Actinidia37475 Actinidia chinensis
Ah.02g120100 Amaranthus hybridus
AL2G34890 Arabidopsis lyrata
Aqoxy3G04184 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea
AT1G75010 Arabidopsis thaliana
ATR0807G004 Amborella trichopoda
Atru.chr11.1028 Acer truncatum
AUR62003477 Chenopodium quinoa
AUR62017786 Chenopodium quinoa
BcaC03g15537 Brassica carinata
BcaC08g46933 Brassica carinata
BcaC08g46956 Brassica carinata
BcaNung05827 Brassica carinata
BolC2t09256H Brassica oleracea
BolC6t39938H Brassica oleracea
BraA07t31608Z Brassica rapa
C02p32190 Brassica napus
C06p49010 Brassica napus
CAN.G282.84 Capsicum annuum
CANSAT78G0289 Cannabis sativa
CARHR068320 Cardamine hirsuta
Carub.0002s2179 Capsella rubella
Ca_11197_v3 Cicer arietinum L.
Cc11_g03340 Coffea canephora
Cc11_g03350 Coffea canephora
CDE04G0645 Ceratophyllum demersum
CDE04G1248 Ceratophyllum demersum
Ciclev10006110m.g Citrus clementina
Ciclev10006553m.g Citrus clementina
CiPaw.05G164400 Carya illinoinensis
ClCG01G006950 Citrullus lanatus
COL.COLO4_27539 Corchorus olitorius
COL.COLO4_34905 Corchorus olitorius
Cpa.g.sc2.85 Carica papaya
CsaV3_5G017370 Cucumis sativus L.
CSS0016054 Camellia sinensis var. sinensis
CSS0018736 Camellia sinensis var. sinensis
CSS0036943 Camellia sinensis var. sinensis
CSS0046499 Camellia sinensis var. sinensis
DCAR_030323 Daucus carota
Dinv02708 Davidia involucrata
Duzib248G0842 Durio zibethinus
ECA233G5323 Erigeron canadensis
EL10Ac6g15397 Beta vulgaris
Eucgr.G02041 Eucalyptus grandis
FAN07G0462 Fragaria x ananassa
FAN12G3615 Fragaria x ananassa
FAN17G2536 Fragaria x ananassa
FAN22G1875 Fragaria x ananassa
FvH4_4g36030 Fragaria vesca
Glyma.10G280500 Glycine max
Glyma.20G109150 Glycine max
Gohir.A01G144000 Gossypium hirsutum
Gohir.D01G136700 Gossypium hirsutum
Gorai.002G169200 Gossypium raimondii
GSVIVG01010290001 Vitis vinifera
HanXRQChr04g0127681 Helianthus annuus
HanXRQChr12g0365871 Helianthus annuus
Haze_10724 Corylus avellana
Hma1.2p1_0933F.1_g238390 Hydrangea macrophylla
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla
HPP92_025367 Vanilla planifolia
Hund12802 Selenicereus undatus
Lalb_Chr21g0306871 Lupinus albus
Lj5g0011768 Lotus japonicus
Lj6C727G2 Lonicera japonica
Lsat_1_v5_gn_8_33901 Lactuca sativa
Manes.17G092000 Manihot esculenta
Mapoly0058s0047 Marchantia polymorpha
MD16G1009700 Malus domestica
Medtr1g112280 Medicago truncatula
MELO3C005216.2 Cucumis melo
Migut.E00572 Erythranthe guttata
MSTRG.2098 Avicennia marina
Nitab4.5_0000944g0040 Nicotiana tabacum
Nitab4.5_0004543g0020 Nicotiana tabacum
Nn4g24781 Nelumbo nucifera
Oeu001141.1 Olea europaea
Os09g0555600 Oryza sativa ssp. japonica
Peaxi162Scf00097g00232 Petunia axillaris
Peaxi162Scf00097g02317 Petunia axillaris
PGR142G0977 Punica granatum
Phvul.007G020500 Phaseolus vulgaris
Potri.010G099300 Populus trichocarpa
Prupe.1G340900 Prunus persica
Psat6g231440 Pisum sativum
PSO063G3495 Papaver somniferum
QL03p041041 Quercus lobata
RcHm_v2.0_Chr4g0445651 Rosa chinensis
Rhsim09G0078600 Rhododendron simsii
Sabra10G0071900 Salix brachista
SalBow2G2121 Salvia bowleyana
SalBow2G2705 Salvia bowleyana
Sc17g0005480 Simmondsia chinensis
Sed0027541 Sechium edule
SEGI_38740 Sequoiadendron giganteum
SGA_v2.0_scaffold470G52072 Striga asiatica
Solyc01g007880.4 Solanum lycopersicum
Sopen01g003410 Solanum pennellii
Sp5g30140 Schrenkiella parvula
TAR622G0072 Trochodendron aralioides
THA.LOC104809054 Tarenaya hassleriana
Thecc.02G299300 Theobroma cacao
Thhalv10018185m.g Eutrema salsugineum
TPR.G2437 Trifolium pratense
TWI53G1444 Tripterygium wilfordii
unitig_699.g19471 Utricularia gibba
vmacro10765 Vaccinium macrocarpon
vmacro10766 Vaccinium macrocarpon
VMungo0720G1053 Vigna mungo
Zm00001eb320640 Zea mays

User provided reference genes

Program Settings