Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p45360 Brassica napus
Aa31LG6G16930 Aethionema arabicum
Actinidia20591 Actinidia chinensis
Actinidia20592 Actinidia chinensis
Actinidia26119 Actinidia chinensis
Ah.01g010520 Amaranthus hybridus
Ah.01g017780 Amaranthus hybridus
AL7G10050 Arabidopsis lyrata
Aqoxy4G02640 Aquilegia oxysepala
Aqoxy6G03058 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0IBU2N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HWJ5MG Arachis hypogaea
AT4G38150 Arabidopsis thaliana
ATR0605G371 Amborella trichopoda
AUR62010217 Chenopodium quinoa
AUR62013213 Chenopodium quinoa
BcaC06g31423 Brassica carinata
BcaC06g34295 Brassica carinata
BolC7t43606H Brassica oleracea
BraA06t27405Z Brassica rapa
C07p30650 Brassica napus
CAN.G947.37 Capsicum annuum
CANSAT25G1067 Cannabis sativa
CANSAT25G1651 Cannabis sativa
CARHR293910 Cardamine hirsuta
Carub.0007s0004 Capsella rubella
Ca_00389_v3 Cicer arietinum L.
Cc08_g09000 Coffea canephora
CDE02G4616 Ceratophyllum demersum
CDE04G3036 Ceratophyllum demersum
Cfa005407 Carpinus fangiana
Ciclev10028759m.g Citrus clementina
CiPaw.06G113100 Carya illinoinensis
ClCG02G003160 Citrullus lanatus
COL.COLO4_04807 Corchorus olitorius
CsaV3_7G002250 Cucumis sativus L.
CSS0044736 Camellia sinensis var. sinensis
DCAR_025005 Daucus carota
Dinv41852 Davidia involucrata
Duzib052G1107 Durio zibethinus
Duzib132G0679 Durio zibethinus
ECA233G3571 Erigeron canadensis
EL10Ac9g21570 Beta vulgaris
Eucgr.I01549 Eucalyptus grandis
FAN15G2937 Fragaria x ananassa
FAN27G0618 Fragaria x ananassa
FvH4_2g17180 Fragaria vesca
Glyma.01G176900 Glycine max
Glyma.11G065700 Glycine max
Gohir.A13G063800 Gossypium hirsutum
Gohir.D13G058100 Gossypium hirsutum
Gorai.013G065500 Gossypium raimondii
GSVIVG01023844001 Vitis vinifera
HanXRQChr07g0186241 Helianthus annuus
Haze_01948 Corylus avellana
Hma1.2p1_0052F.1_g030470 Hydrangea macrophylla
HPP92_007220 Vanilla planifolia
HPP92_025325 Vanilla planifolia
Hund00104 Selenicereus undatus
Lalb_Chr09g0322551 Lupinus albus
Lj2g0006557 Lotus japonicus
Lj2g0026453 Lotus japonicus
Lj6P318T4 Lonicera japonica
Lj9P409T68 Lonicera japonica
Lsat_1_v5_gn_6_28960 Lactuca sativa
Manes.15G113000 Manihot esculenta
MBI01_g31986_MAGBIO Magnolia biondii
MD05G1145100 Malus domestica
MD05G1145400 Malus domestica
Medtr5g019860 Medicago truncatula
Medtr8g098445 Medicago truncatula
MELO3C024165.2 Cucumis melo
Migut.E01827 Erythranthe guttata
MSTRG.1737 Avicennia marina
Nitab4.5_0000943g0100 Nicotiana tabacum
Nitab4.5_0001968g0030 Nicotiana tabacum
Nitab4.5_0002859g0100 Nicotiana tabacum
Nitab4.5_0009982g0010 Nicotiana tabacum
Nn1g06229 Nelumbo nucifera
Nn3g19301 Nelumbo nucifera
Nn5g27110 Nelumbo nucifera
Nn6g31556 Nelumbo nucifera
Nn6g31560 Nelumbo nucifera
Oeu033356.1 Olea europaea
Os01g0546500 Oryza sativa ssp. japonica
Peaxi162Scf00193g00005 Petunia axillaris
Peaxi162Scf00876g00046 Petunia axillaris
PGR142G2394 Punica granatum
PGSC0003DMG400029290 Solanum tuberosum
Phvul.002G027800 Phaseolus vulgaris
Potri.004G209500 Populus trichocarpa
Potri.009G170400 Populus trichocarpa
Prupe.8G183200 Prunus persica
Psat2g160920 Pisum sativum
PSO541G3341 Papaver somniferum
PSO675G0405 Papaver somniferum
QL11p057006 Quercus lobata
RcHm_v2.0_Chr6g0281671 Rosa chinensis
Rhsim12G0052500 Rhododendron simsii
Sabra04G0141300 Salix brachista
SalBow1G4250 Salvia bowleyana
Sc18g0006850 Simmondsia chinensis
Sed0010179 Sechium edule
Sed0025141 Sechium edule
SEGI_20822 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09644 Striga asiatica
SHI05798 Sapria himalayana
Solyc12g096140.3 Solanum lycopersicum
Sopen12g032020 Solanum pennellii
Sp7g37600 Schrenkiella parvula
TAR376G0479 Trochodendron aralioides
THA.LOC104823440 Tarenaya hassleriana
Thecc.02G149300 Theobroma cacao
Thhalv10005467m.g Eutrema salsugineum
TPR.G18806 Trifolium pratense
TWI75G0077 Tripterygium wilfordii
vmacro08131 Vaccinium macrocarpon
VMungo1215G0649 Vigna mungo
Zm00001eb342190 Zea mays

User provided reference genes

Program Settings